Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0938 ATGTCTTCTCCCTATGAGGTTGAAGAGTGTCGTGGGGTTCTTCGAGTTTACAGTGACGGCTCCATAGTCCGCTCCTCTCAGCCAAGCTTCGCCGTCCCTGTACACGATGATGGCTCTGTCCTGTGGAAGGACGTCCTTTTTGACCCACAGCACGACCTTCAGCTCCGGCTCTACAAGCCGGCTTCCCCTTCCGCCAAGCTTCCCATATTCTACTACATACATGGAGGCGGCTTCTGCATTGGGTCCCGCACATGGCCCAACTGCCAAAACTACTGTTTCCGCCTTGCGTCTGAGCTTCAAGCGGTTGTTATCTCACCTGACTATCGACTCGCTCCTGAGAATCGGCTACCGGCTGCCATCGAGGATGGGTACAAGGCTGTGAAGTGGCTCCAAGCTCAAGCTTTGGCTGAGAACCCTGATACCTGGTTAACCGAGGTAGCCGATTTTGGGCGAGTTTTCATTTCTGGAGACTCGGCAGGAGGTAACATCGCCCATCACTTGGCGGTTCAGCTGGGATCGTTGGAGTTGGTGCCGGTTGGGGTGAGAGGTTATGTGTTGTTGGCCCCATTTTTTGGTGGGACAGTGAGGACCAAGTCGGAGGCTGAGGGACCTAAAGACGCCTTTCTGAATCTGGAGCTGATTGACAGGTTCTGGAGGTTATCTATACCTACTGGTGATACCACTGACAATCCATTGGTGAACCCGTTTGGGCCTCTTAGCCCCAGTCTTGAACCAGTGGATCTCCTCCCCATTCTAGTGGTTGCTGGGGGAAGCGATCTTTTGAAAGACCGGGCTGAGGATTATGCAAAGAGGCTCAAACAGTGGGAAAAGAAGGTCGAGTACGTTGAATTTGAAGGGCAACAGCACGGATTCTTCACTATTTTTCCTACCTCGGAGGCTGCAAATAAGTTGATGTTGATCATTAAACGATTCGTAATTGAAAATTCTAATTAA 954 0.5136 MSSPYEVEECRGVLRVYSDGSIVRSSQPSFAVPVHDDGSVLWKDVLFDPQHDLQLRLYKPASPSAKLPIFYYIHGGGFCIGSRTWPNCQNYCFRLASELQAVVISPDYRLAPENRLPAAIEDGYKAVKWLQAQALAENPDTWLTEVADFGRVFISGDSAGGNIAHHLAVQLGSLELVPVGVRGYVLLAPFFGGTVRTKSEAEGPKDAFLNLELIDRFWRLSIPTGDTTDNPLVNPFGPLSPSLEPVDLLPILVVAGGSDLLKDRAEDYAKRLKQWEKKVEYVEFEGQQHGFFTIFPTSEAANKLMLIIKRFVIENSN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0938 317 Coils Coil 258 278 - -
Vvi6g0938 317 Pfam alpha/beta hydrolase fold 71 292 IPR013094 GO:0016787
Vvi6g0938 317 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 IPR033140 -
Vvi6g0938 317 Gene3D alpha/beta hydrolase 14 313 IPR029058 -
Vvi6g0938 317 PANTHER ARYLACETAMIDE DEACETYLASE 9 296 - -
Vvi6g0938 317 SUPERFAMILY alpha/beta-Hydrolases 4 311 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0938 Vvi-Chr6 12254105 12255136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0938 7 306 Carbohydrate Esterase AT1G68620 35.370 5.66e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0938 - - vvi:100249629 648.277