Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0917 ATGCATCAACCAATGATGACTAACATATTACCCATACAAGTAATCGATAAGGACATAAAACCATCCAACTTGATGGTAAACCACAAAGGGGAAGTAAACATTATAGATTTTGGTGTGAGTACTATGCTAGCAAGCTCATTTAGTCCAAGGAACACATTTGTTGGGGTTGACAATTACATATTGTTTGAGAGAATTAAATGA 201 0.3483 MHQPMMTNILPIQVIDKDIKPSNLMVNHKGEVNIIDFGVSTMLASSFSPRNTFVGVDNYILFERIK* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0917 66 Gene3D Transferase(Phosphotransferase) domain 1 6 66 - -
Vvi6g0917 66 SUPERFAMILY Protein kinase-like (PK-like) 13 60 IPR011009 -
Vvi6g0917 66 Pfam Protein kinase domain 13 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0917 66 ProSiteProfiles Protein kinase domain profile. 1 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0917 66 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE DSOR1-LIKE PROTEIN 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0917 Vvi-Chr6 11511855 11512548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0917 14 65 MAP Kinase Kinase Gene Family AT5G56580 69.231 9.28e-18 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Vvi6g0917 Pkinase 3.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0917 K04368 - dcr:108213025 75.8701