Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0903 ATGGGGTTTCTCTTGAAAGAAGCTCTCAAGTCTCTCTGCGGCGTCAATCAGTGGTCTTATGCTGTTTTCTGGAAGATTGGTTGCCAAAATCCTAAGCTGTTAATTTGGGAAGAATGTCATTGTGAATTCATACCAAGTTCTGGTCTTCCGCATGGTTCTGGAATGGAGAACTCAGAAGTGCCTTTTGAAGACTGGGAAGGTTGCTGGGTGTTTCCTGAAACTCGTATTTCTCAGCTTGATGGTCAAGCTGTGGAGTCGATCTATTTTCTGGTCAACAAAATGATGATGAATAACCAGGTCAATATAGTAGGAGAAGGGATAGTGGGACGGGCTGCATTCACAGGAAAACATCAGTGGATTCTTTCAGAAAACTACACTAGGGATGCCCATCCACCAGAGGTTCTGAATGAGGTTCATCACCAATTTTCAGCTGGCATGCAGACAGTTGCAGTCATTCCTGTCCTTCCTCATGGTGTCATTCAATTTGGTTCATCCTTGGCTATTATGGAGAATGCTGGATTTGTGAATGATGTGAAGAGTTTGATTCTTCAACTAGGATGTGTCCCTGGTGCTCTTTTATCTGAGAGCTATGCAATAAAAGAAACTAGCCAGAACATTGGGGAACCCATCTCTGTTGCAGCCTCCATCTATGGGGATCCATCTCGAAATTATGAAGTGACAAACTCAAGTCCTTTTATTGCTGATGGCTGTGATCAACAAAGCAATTCATCACAGGCGTCAAGGCTTGTTGGTCAACCTTCCCATTCAATAATGAGACAGATTCAAGATAACCAGCCGATTAATGCTTCGACATTTCATAGCCCTAACCTGATCCAAACTTTGGTTAAATCCCATGCTGACCAGTGCCAGCAAAAGCTTCCTTCAGTAATGAAACCTAAGCTTTCTTTCCGAAGTCAACTAGAAAGCGAGGTTGCAAAAGCTGAAGTGATCACATCAAATCCAGATGTATGGCTGAATCGGCATGGTGTTTCATACAATGCACGATTTGGATTCAATCATCAACCTAGTGTTGGTCCATCAGGCTCAAGTGCTAGCAACCCAAGATTAATGGAAAATCAGGTATTGTCAGATGCTGGCGCACGGGGTCATATTAACAATAATTTAAGTGGACCAAGTTGCTTTCTCTCATCTCAACTCAGAACAAATGGAGGCCTAGACTCTGATTCTCACAAAAGTTCAGATATTGCCCCTTTTCTTGGAGAAGGTGTACGTATGGGTAATTATCTAAGATCCATTTCAATTCCACCTTCCGTCTTAAACACAAATAAGTCAGCTGACATAAGTCTCTCTTGCACTCAATTGACTGGGATTGGGCTTCAAAATGCTGATTCATTGAAATCAGAGGTGATTCCTTTATCTGATCAAGTAGATCATTTAAATATTAGTCATATGCTCTCAGGAGATTCTGATCATAGACATCATTTGACAAATGAGAAATGTACTGAAAAGGAGTTGGTTCCTAGGAGACAAAAAATAGAAAATGATTTATTCCAAGCACTTGGTATCCCATTAACTCGTGCAGATGCACAGATGATTTTGAGCGAGCACGTCCCTGATTTTCTTCATGAGTTCCCAAAGCCTGAGAATGGAAGTCAGACTCCAAGATCCAAAAATGCTATACATGAGGATACGTGTGTTCGACCTGCATCTGGGGATGACTTGTTTGATATCCTGGGTGTGGATTTTAAGAGCAAATTGTTTAATGGTTATGGGAATGATTCTGTTATTGATGGGCCAGGTACGAGCTCACAAAATCTGTGTAAGGATTCTTCAACATCGATGACCTTTCAGGACACAGGTTCTGACTTTTATCCTATTAGTGAAGGCATATCAGACAGTGGTATTTTTGTTGGGAGTGATGCTGACCACCTTCTAGAGGCCGTTGTCTCGAGGATTCATTCAGCCACCAAGCAGAGCTCAGATGATAATGTGTCTTGTCGAACAACATTGACAAAGATTAGTAGCTCCTCTGTTCCTAGCACTTCTCCCACCTATGGGCGAGGTAATATGTCTGATCAGATGCAGAGGAACTTATTTGGTCTTCCTCCGGAGAAATCTGGGACAATGGGTTCTAGTTCCTTTAGATCTGGGTGTAGCAAGGATGAAAGAGGAAATTGTTCTCAAGGTAGTTCCATTTATGGATCTCAAATTAGTTCATGGGTTGAACAGGGTCATAGTTTGAAGCGTGAAAGTAGTGTTTCAACTGCTTATTCTAAAAGGCCTGATGAGATTGGCAAATCCAATCGAAAAAGGTTTAAACCTGGCGAGAATCCCCGACCTAGGCCAAAAGATCGCCAAATGATCCAAGATCGTGTGAAAGAGTTACGCGAAATTGTACCAAATGGGGCAAAGTGTAGCATTGATGCACTGCTTGAACGCACCATCAAGCATATGCTTTTCTTGCAAAGTGTCATGAAGCATGCAGACAAGCTAAAGCAAACTGGAGAGTCTAAGATTATTAATAAGGAAGGTGGACTGCACTTGAAAGACAACTTTGAGGGAGGAGCAACATGGGCATTTGAAGTTGGCTCACAGTCTATGGTCTGCCCTATAATAGTTGAAGATCTGAATCCACCTCGTCAAATGCTTGTGGAGATGCTTTGTGAAGAACGGGGTTTCTTTCTAGAAATAGCTGATATAATTAGAGGGATGGGATTGACCATCCTGAAAGGGGTGATGGAAACTCGGAATGACAAGATCTGGGCACGCTTTACTGTAGAGGCAAACAGAGATGTGACAAGAATGGAAATATTTATCTCACTCGTTCACCTTCTGGAGCAAACCGTGAAAGGCAGTACATTGTCGGCACATGGCATTGATAATGACAATATGATGGTCCATCACTCTTTTCACCAAGCTGCTTCCATACCTGCAACTGGGAGGGCAAGTAGTTTCCAGTGA 2922 0.424 MGFLLKEALKSLCGVNQWSYAVFWKIGCQNPKLLIWEECHCEFIPSSGLPHGSGMENSEVPFEDWEGCWVFPETRISQLDGQAVESIYFLVNKMMMNNQVNIVGEGIVGRAAFTGKHQWILSENYTRDAHPPEVLNEVHHQFSAGMQTVAVIPVLPHGVIQFGSSLAIMENAGFVNDVKSLILQLGCVPGALLSESYAIKETSQNIGEPISVAASIYGDPSRNYEVTNSSPFIADGCDQQSNSSQASRLVGQPSHSIMRQIQDNQPINASTFHSPNLIQTLVKSHADQCQQKLPSVMKPKLSFRSQLESEVAKAEVITSNPDVWLNRHGVSYNARFGFNHQPSVGPSGSSASNPRLMENQVLSDAGARGHINNNLSGPSCFLSSQLRTNGGLDSDSHKSSDIAPFLGEGVRMGNYLRSISIPPSVLNTNKSADISLSCTQLTGIGLQNADSLKSEVIPLSDQVDHLNISHMLSGDSDHRHHLTNEKCTEKELVPRRQKIENDLFQALGIPLTRADAQMILSEHVPDFLHEFPKPENGSQTPRSKNAIHEDTCVRPASGDDLFDILGVDFKSKLFNGYGNDSVIDGPGTSSQNLCKDSSTSMTFQDTGSDFYPISEGISDSGIFVGSDADHLLEAVVSRIHSATKQSSDDNVSCRTTLTKISSSSVPSTSPTYGRGNMSDQMQRNLFGLPPEKSGTMGSSSFRSGCSKDERGNCSQGSSIYGSQISSWVEQGHSLKRESSVSTAYSKRPDEIGKSNRKRFKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVMKHADKLKQTGESKIINKEGGLHLKDNFEGGATWAFEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADIIRGMGLTILKGVMETRNDKIWARFTVEANRDVTRMEIFISLVHLLEQTVKGSTLSAHGIDNDNMMVHHSFHQAASIPATGRASSFQ* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0903 973 CDD bHLH_AtLHW_like 763 832 - -
Vvi6g0903 973 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 759 808 IPR011598 GO:0046983
Vvi6g0903 973 MobiDBLite consensus disorder prediction 658 715 - -
Vvi6g0903 973 MobiDBLite consensus disorder prediction 658 683 - -
Vvi6g0903 973 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 967 IPR043561 GO:0003700|GO:0006355
Vvi6g0903 973 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 181 IPR025610 -
Vvi6g0903 973 MobiDBLite consensus disorder prediction 693 715 - -
Vvi6g0903 973 MobiDBLite consensus disorder prediction 735 773 - -
Vvi6g0903 973 MobiDBLite consensus disorder prediction 749 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0903 Vvi-Chr6 10952852 10962677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0903 554 937 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 56.959 1.53e-121 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0903 - - vvi:100252988 1950.64