Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0852 ATGTATAATGGGAAAGAAACTATTGGTAATGAAGATCAGGTAGTGGAAAATGGTGTTGAATCTACCATAAGGAATCCAACACTTGAGTCGAAACAGTCAGAAAACAATCTTACACATGTTAATGCTCAGGGCGCTGAATCGAGAAATGTGGTCTCCTTTATCAATTCCTCTGCTTCCATAATAAGGAAAAATGGTACTAAAATTCATAAAAGAACCCTCCATTTGAAGGACATGCAGGGCCGAAGTGTTGAATTAATTCTATGGAGAAATTTCTATAATGCGGAAGGACAAAGGCTGCAAAATATGTGGTTATTTCCTGTTCTGGTTGTGAAATCTGCTAGAATCAATGATTTCAATGGGAAAGCAGTGGGGACTATTTCTACTGGCTAG 390 0.3795 MYNGKETIGNEDQVVENGVESTIRNPTLESKQSENNLTHVNAQGAESRNVVSFINSSASIIRKNGTKIHKRTLHLKDMQGRSVELILWRNFYNAEGQRLQNMWLFPVLVVKSARINDFNGKAVGTISTG* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0852 129 Pfam Replication protein A OB domain 50 128 IPR031657 -
Vvi6g0852 129 Gene3D - 26 129 IPR012340 -
Vvi6g0852 129 SUPERFAMILY Nucleic acid-binding proteins 51 127 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0852 Vvi-Chr6 9040040 9040429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0852 50 128 Core DNA Replication Machinery Family AT4G19130 56.098 2.21e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0852 K07466 - vvi:100263039 122.864