Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0846 ATGGCAGACGAAAATCAAAATGAAGTGAAGGATGAAGTGGCAGAACTTGCCCCTTTCGATCCTACTAAGAAGAAGAAGAAGAAGAAGGTTGTAATTCAGGACCCTGCAGATGATTCTGTGGATAAGTTGGCTGAAAAAACCGAAAGCTTGTCAGTTTCTGAAGGGGTTGAAAATACCTTCTCTGGTATGAAAAAGAAGAAGAAGAAACCTGTAGAAACTGATATCTTAAATGACGATGGTGGGGATGGCAAGGAAGATTTGGATGATCATAATGGTGAGGATGAAGAAGGAGAAGGCATTGTCCTACAACCACGGTATCCTTGGGAAGGAAGTGACCGAGACTACAAATATGAGGAGCTTCTTGGTAGGGTGTTTAACATTCTTCGGGAGAATAATCCAGAGCTTGCTGGAGATAGGAGGAGAACAGTTATGAGGCCCCCACAAGTCCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAACTTCATGGATCTGTGCAAGACGATGCATAGGCAGCCAGATCATGTCATGGCCTTCTTGCTGGCTGAACTTGGGACAAGTGGATCGCTTGATGGACAGCAAAGATTAGTTGTGAAGGGAAGATTTGCACCAAAGAATTTTGAAGGGATCTTGCGAAGATATATCAATGAGTATGTAATATGCCTTGGGTGCAAAAGTCCGGACACAATTCTTTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCGAGCAGTGCGGCTCTGGGCGATCAGTTGCTCCAATCAAGGCTGGTTTTGTGGCTCGTGTTGGTCGGCGGAATACTGGAACATGA 810 0.4444 MADENQNEVKDEVAELAPFDPTKKKKKKKVVIQDPADDSVDKLAEKTESLSVSEGVENTFSGMKKKKKKPVETDILNDDGGDGKEDLDDHNGEDEEGEGIVLQPRYPWEGSDRDYKYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEQCGSGRSVAPIKAGFVARVGRRNTGT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0846 269 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Vvi6g0846 269 MobiDBLite consensus disorder prediction 30 48 - -
Vvi6g0846 269 Gene3D - 112 254 - -
Vvi6g0846 269 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Vvi6g0846 269 FunFam Eukaryotic translation initiation factor 2 subunit 112 254 - -
Vvi6g0846 269 MobiDBLite consensus disorder prediction 1 22 - -
Vvi6g0846 269 MobiDBLite consensus disorder prediction 60 87 - -
Vvi6g0846 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 118 268 IPR045196 GO:0003743|GO:0006413
Vvi6g0846 269 MobiDBLite consensus disorder prediction 1 99 - -
Vvi6g0846 269 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Vvi6g0846 269 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0846 1 267 Eukaryotic Initiation Factors Gene Family AT5G20920 78.067 4.57e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0846 K03238 - vvi:100263785 525.013