Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0822 ATGTATAGAACAAAGCTTGGAGAGCTCACCAACGAAGGAAAAGATGAGTCTGGATATGCTGAAACCGATCCAACTGGTCGCTATGGTAGATTGGACGAAGTCTTGGGCAAAGGAGCAATGAAGACAGTTTACAAGGCAATAGATGAGGTCCTTGGAATGGAAGTGGCATGGAACCAAGTGAAACTCAATGAAGTTCTCCGATCACCCGATGAGTTACAGCGGCTTTACTCTGAAGTTCATCTCCTCAGCGCCCTCAATCACGATTCCATCATCCAATTCTACACTTCTTGGATTGATGTGGAACGCAAAACCTTCAACTTCATCACTGAATTCTTCACCTCAGGCACCCTCAGAGAATACAGGAAGAAGTACAAAAGGGTGGACATCCGAGCTATTAAATGCTGGGCACGGCAAATCCTCAGGGGGCTTGTTTATCTGCATGGCCATGATCCTCCAGTAATTCACAGAGACCTCAAGTGTGATAACATCTTTGTCAATGGGCATCTTGGAGAAGTTAAGATTGGCGATCTAGGCTTGGCAGCCATTCTCCGGGGCTCCCAATCAGCTCACAGTGTTATAGGAACACCGGAGTTCATGGCACCAGAGTTATATGAGGAAAACTACAATGAACTGGTTGATGTCTACTCATTTGGCATGTGTGTATTAGAAATGCTTACATCTGAGTACCCCTATAGTGAATGCTCCAACCCTGCACAAATTTACAAGAAAGTGACATCGGGAAAGCTTCCTGGAGCATTCTACCGGATTCAAGACTTGGAAGCACAGAGGTTCATTGGGAAATGCTTAGTAACTGCTTCCAAGAGACTACCTGCAAAAGAACTATTGCTTGATCCTTTTCTGGCCTCTGATGAGGCCAAACGGCTTCCTAAACCAAAGCTTGGAAGTCAGAAGCCATTTCTGAATGACATAAGAATAGAGAAACTGCGCTTGAGCGATGATAGAGTAAGGACCAACATGACAATCACAGGGACACTGAATCCTGATGATGATACCATTTTCCTTAAAGTGCAGACTGCTGATAAAGATGGGTCTGCAAGGAACATATATTTTCCCTTTGACATTGTGACTGACACTCCAATTGATGTGGCAATGGAGATGGTGAAGGAGTTGGAGATCACAGATTGGGAGCCATTTGAAATTGCAGATATGATTGATGGGGAGATATCTGCTCTAGTACCACAATGGAAGAAATGGGACATGCCACAGCAACATCACTATGCATTTGATTATCAAGAAGAAGATGAGGGACATAACCATCCATTCCGCTCTTTCTCCTCCTGTTCATCATCCCAAGCTTCGTTTCCGTGTTTGAGCACTTCTCACAGGTTGGACACAATGGCTCAAGGTGGTGATTGGCTCAAAGATGATTTGTTTGACGATACCAGCTCTGAAAGTTCTGCACACTCTGGAAAATATTCCAACTTGAATTACTTTTCTGGCAATGAACACTGTTCCGAAACAAGTACTTTAAGAAGAGAACAGCATCCTGGGGCGAAAACTCAGAAGTCTACAAGGTTTTGCCCTGAAGAGAACTCTAGCACGCGGAAGGCCCTGCCTGGAAAAAGCTACAAGCAAGGCAAGGTTTTGCAGGAGTCACAGAGAGCTCCTGGTTCTAAGGATAAGTTCGCAATGGAGACCATTAGATTAACAAGAAACCGCTCATTAGTAGATGTGCGAAGCCAGCTACTGCATAGAACATTGGTGGAGGAGGTGCACAAAAGACGGTTGTCCAAGACGGTTGGAGCTGTGGAAAACATTGGGTTTCAGGCACCCTGCAATGTCTCCGGGAAGGTATCACAGAAACCAACTGGTGCTCATTCCACAAGAACTACAAGAGATGGAAAAGGGCAAGGATCTCAAAGAAGAAGAGCTTAA 1896 0.4488 MYRTKLGELTNEGKDESGYAETDPTGRYGRLDEVLGKGAMKTVYKAIDEVLGMEVAWNQVKLNEVLRSPDELQRLYSEVHLLSALNHDSIIQFYTSWIDVERKTFNFITEFFTSGTLREYRKKYKRVDIRAIKCWARQILRGLVYLHGHDPPVIHRDLKCDNIFVNGHLGEVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFYRIQDLEAQRFIGKCLVTASKRLPAKELLLDPFLASDEAKRLPKPKLGSQKPFLNDIRIEKLRLSDDRVRTNMTITGTLNPDDDTIFLKVQTADKDGSARNIYFPFDIVTDTPIDVAMEMVKELEITDWEPFEIADMIDGEISALVPQWKKWDMPQQHHYAFDYQEEDEGHNHPFRSFSSCSSSQASFPCLSTSHRLDTMAQGGDWLKDDLFDDTSSESSAHSGKYSNLNYFSGNEHCSETSTLRREQHPGAKTQKSTRFCPEENSSTRKALPGKSYKQGKVLQESQRAPGSKDKFAMETIRLTRNRSLVDVRSQLLHRTLVEEVHKRRLSKTVGAVENIGFQAPCNVSGKVSQKPTGAHSTRTTRDGKGQGSQRRRA* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0822 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 608 - -
Vvi6g0822 631 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Vvi6g0822 631 MobiDBLite consensus disorder prediction 507 526 - -
Vvi6g0822 631 ProSiteProfiles Protein kinase domain profile. 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0822 631 SMART serkin_6 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0822 631 FunFam probable serine/threonine-protein kinase WNK9 112 292 - -
Vvi6g0822 631 MobiDBLite consensus disorder prediction 8 25 - -
Vvi6g0822 631 MobiDBLite consensus disorder prediction 493 547 - -
Vvi6g0822 631 Gene3D Transferase(Phosphotransferase) domain 1 112 295 - -
Vvi6g0822 631 CDD STKc_WNK 27 287 - -
Vvi6g0822 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Vvi6g0822 631 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Vvi6g0822 631 MobiDBLite consensus disorder prediction 601 631 - -
Vvi6g0822 631 SUPERFAMILY Protein kinase-like (PK-like) 30 288 IPR011009 -
Vvi6g0822 631 MobiDBLite consensus disorder prediction 601 621 - -
Vvi6g0822 631 MobiDBLite consensus disorder prediction 1 25 - -
Vvi6g0822 631 Pfam Protein kinase domain 32 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0822 Vvi-Chr6 8665476 8668929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0822 19 604 MAP Kinase Kinase Kinase AT5G58350 61.840 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vvi6g0822 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0822 K08867 - vvi:100255269 1269.22