Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0821 ATGGGTAATTACAGGTTTAGGTTATCGGATATGATGCCAAATGCCTGGTTTTACAAGCTCAAAGACATGAGCAGAGCCAGAAACCATAACACCGCTCAGTCCATCAAGAAAAAGCTACCCTCACCAGCTGCTACATCACAGAAAACCAACCTCTCTCAGCCAAGATACTCCTACTACTACAACGAAGAGCCCATCAGAGCAGATATGCTCTATGGTTCACCTGTCAACCCGAAAGCCTCAGACACTCATTTTCCTGATCCACCAAGAAAATCATCCAAGAGAAGACCCAAGAGGAAAACCATTTATAAGCCCTCTCCTACACTAGTCTCCTCTGTTTCAGCTGGTTATGGCTGTCCTGCTGCATTTGAATCTGTCTGGACTGAGCATGATCCAACTGAGTCTGAGGACTGCTTTGTCTCAGCTATTGAGCCCGGCCACAATGTATCTTTGCTGCCAGAAGTTGGGCCAAATACCGATGTTGCGTCTGACACATTCAATGGACTAGCCCCCTTGTCGACCTCTTGCAGCTGTAGAGTCTGTTCTTCAACTACGGATATTTTCATTGATGTGAGTAAGAAATCCTTTTCTAGTAAAGTTGAGAAGCTAGACGAGTTTGACACAGTTTCAGAGCTAGAGCTTCCTCAAGTATCAACCAAGCCAGCAAGATTCAGGGAGACAACTGTGGAAGCTGCCAGGCACAGAAGAAGTTCGTCTCAATTGGAGGAGATCAAAGCTCAGAGATCTCTTTCTATCAAAATTGTCAAGGAGGGTAGCAAACAGACTCAAAAAGAGCCCAAGGCCAATCCTCTTGTCCGAAAGCCTACTGCAAATGCAGCAGGAGTTAAGCTCAGAACCAATTCTCCAAGACTTGCAAGCAGGAAGATACAGGCCTATGCCAGAAAGAGTGTTTATTCTAGAACAAGCTCAAAGGCCCAGAGTAGGAGCCTTTCAGAAAGCTGTGCAGTAGTGAAGGCCTCATTTGACCCAGAAAGAGACTTCAGGGATTCAATGTTAGAAATGATCGTGGAGAACAACATCCGGGCATCCAAGGATTTGGAAGAGCTTCTTGCATGCTACCTTTCTTTGAATTCTGACGAGTACCATGATCTCATTGTCAAGGCTTTTGAGCAAATCTGGTTCGATACAAGTGATCTTCGCATGATCATCCATAAGAATAAGAATCTTAACACAGGCCATGTCATACGAGTAAGTTTTTGGTTGCATACCAACTCTGTAATTTCTACTCCCTCCGTTCCTTTGCTTTTTTCTTTTTATTATTTCACTAGAGTGAACAAAATGCTTGTGAGTAATGAATGGTATATTGGTGTTGGATATTAG 1338 0.4387 MGNYRFRLSDMMPNAWFYKLKDMSRARNHNTAQSIKKKLPSPAATSQKTNLSQPRYSYYYNEEPIRADMLYGSPVNPKASDTHFPDPPRKSSKRRPKRKTIYKPSPTLVSSVSAGYGCPAAFESVWTEHDPTESEDCFVSAIEPGHNVSLLPEVGPNTDVASDTFNGLAPLSTSCSCRVCSSTTDIFIDVSKKSFSSKVEKLDEFDTVSELELPQVSTKPARFRETTVEAARHRRSSSQLEEIKAQRSLSIKIVKEGSKQTQKEPKANPLVRKPTANAAGVKLRTNSPRLASRKIQAYARKSVYSRTSSKAQSRSLSESCAVVKASFDPERDFRDSMLEMIVENNIRASKDLEELLACYLSLNSDEYHDLIVKAFEQIWFDTSDLRMIIHKNKNLNTGHVIRVSFWLHTNSVISTPSVPLLFSFYYFTRVNKMLVSNEWYIGVGY* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0821 445 MobiDBLite consensus disorder prediction 255 284 - -
Vvi6g0821 445 MobiDBLite consensus disorder prediction 70 104 - -
Vvi6g0821 445 MobiDBLite consensus disorder prediction 28 50 - -
Vvi6g0821 445 ProSiteProfiles OVATE domain profile. 322 381 IPR006458 -
Vvi6g0821 445 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 199 382 IPR038933 GO:0045892
Vvi6g0821 445 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Vvi6g0821 445 Pfam Transcriptional repressor, ovate 326 381 IPR006458 -
Vvi6g0821 445 NCBIfam uncharacterized plant-specific domain TIGR01568 321 380 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0821 Vvi-Chr6 8662385 8664302 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vvi6g0821 Ovate 8.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0821 - - vvi:100248417 736.102