Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0805 ATGTGCTTTGTGGTAGCTGCCGCTATTGTGATCCCTATATCTGCACAACTCTCTCCTGATTTTTATGACAAGTTGTGCCCGCAGGCATTGCCCACCATTAGATCAATTCTCGAAAAGGCAATCTATCATGAGCCACGCCTTGGAGCATCACTGCTTCGAGTGCACTTCCATGACTGTTTTGTGAATGGTTGTGATGCATCAGTTCTGCTAGACGACACCCCCAACTTCACTGGTGAGAAGACAGCCGGGCCCAATCTCAATTCCCTTAGGGGTTTTGAAGTGATAGATGAAATCAAAGAAGCCGTTAACTCAGCTTGCTGCGGCAATGTGGTGTCATGTGCAGATATCCTAGCTGTTGCAGCTCGCGACTCTGTTGCCATTTTGGGAGGTCCATCATACCAAGTATTATTGGGCAGAAGAGATGCGAGAACAGCAAGTCTTAACGATGCAAACAGCGATATCCCACGTCCAATTTTTGACTTCCCAGCGCTTCTCTCCAACTTTCAAAATCATGGGCTAGACCTAAATGACCTTGTTCTGCTCTCAGGCGGCCACACCATTGGCCTTGCCCGTTGCACCAATTTCAGGGACAGGATCTACAACGAGACCAACATAAAACCCAAGTTTGCTGCCTCCTTGCGTGGGATATGCCCTAAAGAGGGAGGAGATGACAACACAGCAACTCTAGATGCTACAACAGCAAACTTCGACACAGAGTACTTCAAAGACTTGCTGAAACTAAAGGGTCTCCTCCATTCTGATCAGGAGCTCTTCAAGGGTGTTGGCAGTGCTAGCGATGGTCTAGTGCAATACTACAACAACAACCCAGGAGCCTTCTTTGCAGACTTCGGTGTTTCCATGATCAAAATGGGCAACATGAAGCCTCTCACTGGATCAGACGGAGAGATCAGGATGAATTGCCGGAAAATTAATTAA 936 0.4744 MCFVVAAAIVIPISAQLSPDFYDKLCPQALPTIRSILEKAIYHEPRLGASLLRVHFHDCFVNGCDASVLLDDTPNFTGEKTAGPNLNSLRGFEVIDEIKEAVNSACCGNVVSCADILAVAARDSVAILGGPSYQVLLGRRDARTASLNDANSDIPRPIFDFPALLSNFQNHGLDLNDLVLLSGGHTIGLARCTNFRDRIYNETNIKPKFAASLRGICPKEGGDDNTATLDATTANFDTEYFKDLLKLKGLLHSDQELFKGVGSASDGLVQYYNNNPGAFFADFGVSMIKMGNMKPLTGSDGEIRMNCRKIN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0805 311 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 243 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 Gene3D Peroxidase, domain 2 155 290 - -
Vvi6g0805 311 PANTHER PEROXIDASE 72-RELATED 13 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 CDD secretory_peroxidase 16 310 IPR033905 GO:0004601|GO:0042744
Vvi6g0805 311 Pfam Peroxidase 34 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 FunFam Peroxidase 20 158 - -
Vvi6g0805 311 SUPERFAMILY Heme-dependent peroxidases 16 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 FunFam Peroxidase 155 290 - -
Vvi6g0805 311 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601
Vvi6g0805 311 ProSiteProfiles Plant heme peroxidase family profile. 16 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 Gene3D - 20 308 - -
Vvi6g0805 311 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0805 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0805 Vvi-Chr6 8545493 8546616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0805 13 311 Peroxidase AT5G05340 56.954 1.12e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0805 K00430 - vvi:100246743 616.69