Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0798 ATGGCTCAGGCAGCTCTGCGATGGCTAAGCCTTGTGGCTGTGGTCTGGCTTCAGTTCATAAACGGAACAAACACCAATTTCCCAGCTTATTCTTCTGAGCTCAAACAGCTACTGTCAATGTCCCAGTTGCAACTCAACAACCTTGCCTTCGCCTCTGATGCAGGGAAGATCTTGGGGTGTTTAGCTGGCTTTGCTGCAGATCACCTCCCCTTCTCGGTCGTCCTCATCATTGGCTCTATTCTGGGGTTCATTGGCTATGGAGTTCAGTTTCTATATGTGAGTAACCTCATTTCCTCACTCTCGTACTGGCAAGTCTTTGGGCTCAGTGTTCTGGCTGGGAACAGCATTTGTTGGATCAACACAGTTTGTTACATTGTAGTGATTCGAAACTTCCCTTCGTACCGCCAGATAGCAGTGGGCATATCGACTAGCTATATAGGACTGAGTGCAAAGATTTTCACAGATATAGTCGATGCTGTTTGGCCACATTCGTCACCCATTAGAAGAGCAAGAGCCTATCTTCTTTTAAACACTGTTTTACCTTTAGTGGTTTGTGTTATAGCTGCGCCAATAGCTAGAGCTATAGATGCCGGAAAGGAGAGGAAAAAGGAAGGTGGGTTTATAGTAATGTTTGTGATCACCATAGCCACTGGAATCTATGCCGTTATAAGCAGTTTGGGGTCAGTCCCAAGTGGGTTATGGCCGGTGATTAATCTGGTCGTCATGGTAGTGCTGGTCATATTGGCTCCGCTCACGATTCCTTTAGGTGAAAGTTTAGTGGAAGAATGGGGGTTGAGTAACGAAGAAAAAGTACATGATTTCCCCATAAAGGAATTACATGACAATAGAGAGTTGAGATCAGTAGAGGAAGGAATGGTAGAGGAAGAGGTTGTTGTTGCTGCAGAAGTTTGTGATGAAGTGGTTGCCAAGGAGGAGATTGGCTTGAAAACCATGCTCAGTAGATTAGATTTTTGGCTTTATTTCTTGATATATTTTCTGGGTGCAACACTTGGGTTGGTGTTCTTTAACAACTTGGGACAAATATCAGAGTCTCGTGGGTATTCCAGCACTTCCTCCCTTGTGTCTCTGTCTTCAGCATTTGGGTTCTTTGGACGTCTCATGCCATCTCTTCAGGACTACTTCTTCTCGAGGAGTAAGTATGTGGTGTCAAGGCCAGCGTCCTTGGTAGCCCTGATGGCACCAATCTCAGGAGCCTTCTTCATTCTCGTCAATCCAACCAACCTCTGCCTCTACATCAGTACAGCCATAATAGGAGTCTGCACCGGCGCAATTTCTTCCATTGCTGTCTCCCTCACTTCAGACCTTTTCGGGACAACTAATTTTGGCGTAAACCATAACGTTTTGGTTGCCAATATTCCCCTGGGGTCCTTCCTCTTTGGCTTCTTCGCAGCTCGTCTCTACCACAAAGAAGGACATGGAGGAGGTGGGAGGTGCATTGGCATTGAATGCTATCGTGGAACTTTTATCAACTGGGGGTCACTTTCACTCCTTGGCACGTTCCTATCCCTTGTCCTCTACGCCCGCAATCGGAAATTCTACTTGCAGAGGTTACAGGCAGCAGTCACCCCCCGTTAA 1596 0.4649 MAQAALRWLSLVAVVWLQFINGTNTNFPAYSSELKQLLSMSQLQLNNLAFASDAGKILGCLAGFAADHLPFSVVLIIGSILGFIGYGVQFLYVSNLISSLSYWQVFGLSVLAGNSICWINTVCYIVVIRNFPSYRQIAVGISTSYIGLSAKIFTDIVDAVWPHSSPIRRARAYLLLNTVLPLVVCVIAAPIARAIDAGKERKKEGGFIVMFVITIATGIYAVISSLGSVPSGLWPVINLVVMVVLVILAPLTIPLGESLVEEWGLSNEEKVHDFPIKELHDNRELRSVEEGMVEEEVVVAAEVCDEVVAKEEIGLKTMLSRLDFWLYFLIYFLGATLGLVFFNNLGQISESRGYSSTSSLVSLSSAFGFFGRLMPSLQDYFFSRSKYVVSRPASLVALMAPISGAFFILVNPTNLCLYISTAIIGVCTGAISSIAVSLTSDLFGTTNFGVNHNVLVANIPLGSFLFGFFAARLYHKEGHGGGGRCIGIECYRGTFINWGSLSLLGTFLSLVLYARNRKFYLQRLQAAVTPR* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0798 531 Gene3D MFS general substrate transporter like domains 3 514 IPR036259 -
Vvi6g0798 531 Pfam Nodulin-like 7 254 IPR010658 -
Vvi6g0798 531 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 521 - -
Vvi6g0798 531 SUPERFAMILY MFS general substrate transporter 208 522 IPR036259 -
Vvi6g0798 531 SUPERFAMILY MFS general substrate transporter 6 192 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0798 Vvi-Chr6 8478499 8480381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0798 1 523 Nodulin-like Gene Family AT2G30300 47.180 4.42e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0798 - - vvi:100263887 947.577