Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0795 ATGGCAACCCACAAAAATACCATCCATATCCCCTTCTTGCTTGAGAAGATGGATGTTGTGCTTGTTAAACCTGCAAAACCCACTCCTTCTGAGGTCCTTTCTTTCTCTACCATTGACAATGACCCCAATCTTGAGATCATTTGCCAAACCATTTATGCGTACAAAGCAAAGAGATTTTCCTCTAGTGATGATAATGGTCATGATCTAGCTTCCTCGAACGGGAAAACCCATGATCTGGATTCTTGTGACCCAGCTAGTGTAATCAGTGACGCCCTCTCCAGAGTGTTAGTTTATTACTATCCTCTAGCTGGGAAGCTCAAGAGGCACAGTGATGGAGAACTTAGACTCAACTGCAATGCTGCTGGGGTGCCTTTTCTAGTGGCAACAGCCAATTGCGAGCTTTCTTCCCTCTGTTATTTAGATGGGATTACTGTCGAACTTGCTAAACCCTTTGTGTTTGATTGGCCAGGCGATGGTGGCGATGGTAGACACCCTCTGGTGCTGCAGGTGACTAAGTTTTCTTGTGGGGGTTTCACAATTGGAATGGGCATATCCCACTCAGTCTGTGATGGGTTCGGTGCTGCTCAATTCTTCCGTGCCTTGGCTGAGCTTGCAAGCGGAAAGAGCGAGCCAACTGTGAAACCAGTGTGGGAGAGGGAGAGGTTAGTGGGAACACCCAGAAAAAACCCCTTCCAAATCCCTATAGATGAGGCTTCTTTAGCAACTTCACCACACTTGCCACCCACTGAAATTGTGCATGACTGCTTCAACGTGAATAGTGAGAGTATCAAAAGACTCAAAACTAGCTTGATGAAACAATGTGGGGATGAAGCTCCCAAAGAGGGTTTCACCACCATTGAAGCCCTCGGTGCCTATGTTTGGAGATCTAGGTTTAGAGCCTTAGAATTGAACTCAGATGGAACAACCCTCTTCTCCATGACTGTGGGGTATAGACGCCTTCTCAATCCCCCTCTGCCTGATGGGTATTACGGGAATGCTTTTGGTGCTGCAAATGCCACAACAATGGGGAAGGATCTCAATAAAGGACCTCTCTCAAGGGTTTCCAAACTGATCAAAGAAAGCAAGAAGATTGCTTGTAGCTCTGACTACATTAGGAACTCAATAGACATGCTGGAGTTCATGAGACGACAAAATACAAAGTTCGAAACCAACGACGCAACCGTGGTTTTAACAGACTGGCGAAGACTGGGTCTAGTTGAAGAAGTAGATTTCGGGTGGAAGGAGCCTGTGAACATGATACCGGTGCCATGGAACATGTTCAACTACGTGGGTTTATGTATTCTCACTTCTCCTTCCAGTCTGGATCCTGCAATGAAAGGTGGGGTGAGGGTCCTTGTTTCCCTTCCTGCAGCTGCCATACCCAAGTTCAAGGAAGAGATGAATGCCCTCAGTCTTGGAGATGACAAGGCTTTAGCTTGA 1440 0.4667 MATHKNTIHIPFLLEKMDVVLVKPAKPTPSEVLSFSTIDNDPNLEIICQTIYAYKAKRFSSSDDNGHDLASSNGKTHDLDSCDPASVISDALSRVLVYYYPLAGKLKRHSDGELRLNCNAAGVPFLVATANCELSSLCYLDGITVELAKPFVFDWPGDGGDGRHPLVLQVTKFSCGGFTIGMGISHSVCDGFGAAQFFRALAELASGKSEPTVKPVWERERLVGTPRKNPFQIPIDEASLATSPHLPPTEIVHDCFNVNSESIKRLKTSLMKQCGDEAPKEGFTTIEALGAYVWRSRFRALELNSDGTTLFSMTVGYRRLLNPPLPDGYYGNAFGAANATTMGKDLNKGPLSRVSKLIKESKKIACSSDYIRNSIDMLEFMRRQNTKFETNDATVVLTDWRRLGLVEEVDFGWKEPVNMIPVPWNMFNYVGLCILTSPSSLDPAMKGGVRVLVSLPAAAIPKFKEEMNALSLGDDKALA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0795 479 Gene3D - 236 467 IPR023213 -
Vvi6g0795 479 Pfam Transferase family 15 469 - -
Vvi6g0795 479 Gene3D - 13 235 IPR023213 -
Vvi6g0795 479 PANTHER ACYL TRANSFERASE 4 12 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0795 Vvi-Chr6 8441028 8442467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0795 83 465 Monolignol Biosynthesis Gene Families AT5G48930 28.186 5.65e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0795 K20240 - vvi:100253583 962.985