Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0777 ATGGGTCCAGTCGCAGGACCCTTTTCTGAAGAGAAGCTAGTGTGCCAATTCACTGGAAACATGATCCATTCAAAGGGCATTTTTCTTGGAGATGACCCTTTTAATTTTAGCTTGCCTATGCTCTTGGCACAGGGCATTCTGATTCTGCTTTTAACCAGAACCACTTACTACTTTCTGAAACCTCTTGGACAGGGTATGATCTCAGCACAAATTATAGCTGGTATTATCATGGGCCCCTCCATTCTAGGACATGATGGGGCTTATGCAGAGAAGTTGTTTCCACCAGGAGGCAAATTGGTACTTGAAACACTCGCAAATGTTGGCTTCATGCTTCACCTCTTTTTAGTAGGATTGCAGATGGACCCAAGGATATTAAAAAAGGCTGGGAAAACTGCAGTTCTAATAGGCATTGGGGGTTTCATATTGCCTTATGGACTTGGTGAATTGGCGTTTATCATCATACATCATGTGATGACTCTTGATAGGAAATTATCGGTTTCCATTCCTTTCATGGTGGCACTAAATTCTATGACTTCCTTTGTTGTTGTTAGCAGCCTCCTTACTGATCTTAATATTCTGAATTCAGAGCTGGGCCGCTTAGCTACCCAGACATCCATGGTCAGTGACTTGTGTAGCTGGTTCATGGCTACAATGATGAACACAGTAGGCATTGCCGCCCGTGACTCAGATTGGATGTTGCTATGGTCTCTGATATGGCTGCTCATCTTTCTTATCAGCATTGTGTTTGTCTTCCGGCCAATAATAATCTGGATATCGAAACAAACTCCAGAAGGAGAACGAATGGACGAAGTTCTCTTCTTCATCATCATTGTAATGATAATGGGTTGTGCATTCTGTGCTGAGGTCCTTGGCCAGCATGCTGCCTTAGGCCCTTTAGTGTTAGGCATGGCTCTCCCTGATGGACCACCAATTGGAACAATTTTACTGCAGAAGTTTGATACTATGGTTACTGGCTTGCTACTGCCAATTTTCTTTGCTCTCAGTGGCTCAAAAACGAAACTGTTCTCCCTAGGAAAAGGAATGTTTCCCTTCATGGTCGAGTTCATCATCATTTTGGGCTATATAGGGAAGTTCACAGGCACACTTATTCCAGCAATCTTCTCTGGTGTTCCTCGCTGGGATTCTTTATGTCTTGCTATGATCATGTGTTGCAAAGGCATTATCGAGGTTGCCACATACAGCATGTGGAAGGATAGAAAGATCTTAAGCTACCAATCCTATAGCCTTCTGTTAATCACCATGCTGATTGTCACAGGGGTCTGCAGACCCATTGTCGGTTACCTTTATGATCCAGCAAGTAGTCACATGTCCTATAGCAGAAAAAGCATTATGTACCCTAAGCATGATTCGGAGTTTCGAATATTGGTCTGCATCCACAATGAACACAATGTGTCCACCATTATAAACCTCCTTGAAGCCTCACATGCCACCAAAAGCAGCCCCATCTCCATCGTTGCCCTTTGCCTCATGGAGCTCACTGGCAGTTCATCATCTGTTCTTGAATCATATGACTCGAAAAAGAAACTCACTTCTGGTGTAACCCACTTGGGGCATATTATCAATGCCTTCAACTATTATGAGCAGCACAACCATGGGCGTGTGACAGTGCAGCATTTTACGGCCATTGCACCTTATTCAAGCATGCATACAGATATATGTGCTATAGCACTAGAGATGAGGGCGAACATAGTTATCGTCCCCTTCCATAAGCAGATGGCCTTTGGTGGAACAGAGGAAGCTACAGCCACCTCTATTAAGACTGTAAACCTGAATGTCATTGATAAGGCTCCTTGCTCTGTTGGGATCCTGGTTGACAGGGGCCACATTGGTGGGCACAGGTCATTTGTGGCTGGGCATTCATTGTACCATATTGCTTTGCTCTTTCTTGGTGGGGCTGATGATCGAGAAGCTCTTTCATACAGCAGACGTATGGCTGAGGATCCAAAGATAAGACTCACGGTTGTCTGTTTTAGACCATGGGGGGAGCAGGCTTACACTGAAGAAACTGAGGAGTATCTTGACAAAAAGCTGATGAATGAGTTTAAGGCTGATGCAGTGGACAAGATTGTTTACAGTGAAGTCATTGTTAAAGATGGGGAAGGAACAACACAGGTGATTCGGTCCATGGAGGAAGGTTTTGATTTATTTATAGTGGGTAGACACCATGATAAGTCTCCATTTACATTAGGCCTTACTGAATGGCATGAATGCACCGAGCTTGGGCTGATTGGGGATATGCTGGCCGGTTCAGATTTTCTCTTTTCGGTATTGGTGGTGCAGCAGCAGCCATTTGGATTAGGGGTGCAAGATCTCAGCCTCAATGGGGCTTCATGA 2355 0.4446 MGPVAGPFSEEKLVCQFTGNMIHSKGIFLGDDPFNFSLPMLLAQGILILLLTRTTYYFLKPLGQGMISAQIIAGIIMGPSILGHDGAYAEKLFPPGGKLVLETLANVGFMLHLFLVGLQMDPRILKKAGKTAVLIGIGGFILPYGLGELAFIIIHHVMTLDRKLSVSIPFMVALNSMTSFVVVSSLLTDLNILNSELGRLATQTSMVSDLCSWFMATMMNTVGIAARDSDWMLLWSLIWLLIFLISIVFVFRPIIIWISKQTPEGERMDEVLFFIIIVMIMGCAFCAEVLGQHAALGPLVLGMALPDGPPIGTILLQKFDTMVTGLLLPIFFALSGSKTKLFSLGKGMFPFMVEFIIILGYIGKFTGTLIPAIFSGVPRWDSLCLAMIMCCKGIIEVATYSMWKDRKILSYQSYSLLLITMLIVTGVCRPIVGYLYDPASSHMSYSRKSIMYPKHDSEFRILVCIHNEHNVSTIINLLEASHATKSSPISIVALCLMELTGSSSSVLESYDSKKKLTSGVTHLGHIINAFNYYEQHNHGRVTVQHFTAIAPYSSMHTDICAIALEMRANIVIVPFHKQMAFGGTEEATATSIKTVNLNVIDKAPCSVGILVDRGHIGGHRSFVAGHSLYHIALLFLGGADDREALSYSRRMAEDPKIRLTVVCFRPWGEQAYTEETEEYLDKKLMNEFKADAVDKIVYSEVIVKDGEGTTQVIRSMEEGFDLFIVGRHHDKSPFTLGLTEWHECTELGLIGDMLAGSDFLFSVLVVQQQPFGLGVQDLSLNGAS* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0777 784 Gene3D - 40 442 IPR038770 -
Vvi6g0777 784 Pfam Sodium/hydrogen exchanger family 47 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi6g0777 784 PANTHER CATION/H + ANTIPORTER 20 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0777 Vvi-Chr6 8277392 8280258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0777 2 769 Antiporter Super Family AT1G06970 43.428 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0777 - - vvi:100263928 1505.35