Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0776 ATGCTTCACATTTTTGTGCCCTGCAAAACAAATGCTGGCACTACTCAAAATTTCAGGCAACAATTTTGTTACGGCAATGCGTCCAACAATTTACTGTACTGCATCCAAAAGAGGAAAAAGAAGTATGTAATATTTGGTGTGTGTGATGTTTATGGTATTCATCAGGGAGGTATTATCCTGGGACCGTCGGGTTTAGGAAAATCTCCAGCATTCTCCAAATGGGTTTTCCCAGAGAGCAGCATTTATTTCAGCCAAACCGTCGCCTTATTTGGGTGCATGATCTTTATGTTCCTAGTTGGAGTGAAAATGGATACACATCTGATGAGGAAGTCAGGAAGGAGAGGAGTAGTCATAGGCTTCTGCAACTTCTTCTTGCCATTGATAATTGTGGTTGGCTTGGCTCACAATCTCAGAAAAACTAAGACCTTGGCCCACAATATAAGCAATTCTATTTACTGTGTAGCAACACTGATGAGCATGAGTTCCTCCCATGTCATTACTTGCCTTCTAACTGATATCAAGATCCTCAACTCCGAGCTGGGAAGGTTAGCCCTATCCTCATCTATGATAAGTGGCCTGTGCAGTTGGACCCTGGCATTGGGCTCATATGTAATATTTCAAGGCTCAACTGGTCAGTATGAAAGCATGCTAGCATTATCCTTGTCATTTATCATCTTGGTGCTTATCATTGTATACATTCTGCGGCCTATTATGGATTGGATGGTTGAACAGACTGCTGAAGGAAAACCAATCAAGGAGAGCTATGTCTTTAGCATCTTTGTGATGATCTTAGGGAGTGCCTTCCTTGGTGAGATCATTGGCCAGCATTTCATGGTTGGGCCTATAATTTTGGGCATTTTTGTACCGTGTGGACCACCATTAGGATCAGCACTGATTGAGAAGCTCGAGTCCTACACTTCCGCTATTCTTCTGCCACTTTTTTTCGTTATCTACTCGTCGAGAATAAATCTTTCTATAATAAGTTCGAAGAACTTTCTCACTTTGGCAGTCATAGAGTTAGGCGCCTCCGCGGGAAAAATTGTGGGAACCATGTTGCCTGCCATGTACTACAAAATGCCAATCGATGATGCACTGTCGTTAGGCCTTGTCATGAGTGCCCAAGGCATCTGCGAGGTTATAATTTCAGGAAGAGCGCTGATGCTTGGGTACGTCGATGAAGAGTCATATAGCATCATGATCATATGTATGGTTCTCTTCTCCGGAGCCATCGCACCCCTAGTGAAGATGTTGTACAAGCCAAGGAAATACAGATCACAGAAGCGAAGGACAATACTCCATTCCAGACCCGATTCCGAGCTCCGCTTGCTGGCTTGCATCTACCATGAAAACAACACATCTCCCCTCCTTAATCTTCTTGAAGTCTCCAATCCAAGCTTCGGAAGTCCAATCTGCTTTTACGTTGTGCACCTTGTTGACCTTGAAGGCAGATCATCTTCCATGTTTGTGGCTCATCGTCCAGGGAAAAGGAAGTCCGCTCACGCCACCCACTCTAAGCACATCATAAACGCTTTCAGATTATACCAGCAACAAAACAAAGGCGCTGTGACAGTGAATCCCTTCACATCCATTGCACCATACGAGACCATTCATCAAGATGTCTGTGGACTTGCTCTGGACAAGAGGGTGGCTATGGTGCTAGTTCCATTCCATAAGCGGTTTACCGTTGACACCACCGACGCAGCCAACACTACCATCCGGACTGTCAACCGCAACATACTCGAAAACAGCCCTTGCTCCGTCGGCATCTTGGTTGATCGCGGCACGCTGCCTACCAACACCTTCTTGTTTGCCAGCAGAACCGGATACAGAATTGGGGTGTTGTTCGTTGGCGGGGCTGACGATAGAGAGGCACTAGCATACGCCATGCGCATGGCAGAACACCCAAATGTAAGTCTCACAGTGGTTCACTTTGTTGATTCCAGCTCCAAAGACCAGAAATATCACCAGAGAGGATTCGACTATGAACTGATCAATGAATTTAGGCTGGCAAACCTTGGAAGCGAAAGCCTGGTTTTCAAAGAGGAACTGGTAACAGACAGCTTGGGAATTATCACAGCGATCCAAACCTTAGATAACTCGTATGAACTAGTGCTGGTGGGTAGAAGCCATGCAAATGATTCAACAATGTTTGGTGGGTATACAGAATGGAATGAGTTTCCAGAGCTAGGGTTTATCGGGGACATGCTAGCATCCTCAGATTCCAAATGCAAGGCCTCACTACTGGTGGTGCAACAACAAGCATTTGTAGGTGATGGCATGCTGGAACCCTCGCCTTTCATTGAGGGAGATGCATTTGCTGTTGTGGATATGGGAAAAATGTGA 2343 0.4545 MLHIFVPCKTNAGTTQNFRQQFCYGNASNNLLYCIQKRKKKYVIFGVCDVYGIHQGGIILGPSGLGKSPAFSKWVFPESSIYFSQTVALFGCMIFMFLVGVKMDTHLMRKSGRRGVVIGFCNFFLPLIIVVGLAHNLRKTKTLAHNISNSIYCVATLMSMSSSHVITCLLTDIKILNSELGRLALSSSMISGLCSWTLALGSYVIFQGSTGQYESMLALSLSFIILVLIIVYILRPIMDWMVEQTAEGKPIKESYVFSIFVMILGSAFLGEIIGQHFMVGPIILGIFVPCGPPLGSALIEKLESYTSAILLPLFFVIYSSRINLSIISSKNFLTLAVIELGASAGKIVGTMLPAMYYKMPIDDALSLGLVMSAQGICEVIISGRALMLGYVDEESYSIMIICMVLFSGAIAPLVKMLYKPRKYRSQKRRTILHSRPDSELRLLACIYHENNTSPLLNLLEVSNPSFGSPICFYVVHLVDLEGRSSSMFVAHRPGKRKSAHATHSKHIINAFRLYQQQNKGAVTVNPFTSIAPYETIHQDVCGLALDKRVAMVLVPFHKRFTVDTTDAANTTIRTVNRNILENSPCSVGILVDRGTLPTNTFLFASRTGYRIGVLFVGGADDREALAYAMRMAEHPNVSLTVVHFVDSSSKDQKYHQRGFDYELINEFRLANLGSESLVFKEELVTDSLGIITAIQTLDNSYELVLVGRSHANDSTMFGGYTEWNEFPELGFIGDMLASSDSKCKASLLVVQQQAFVGDGMLEPSPFIEGDAFAVVDMGKM* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0776 780 Pfam Sodium/hydrogen exchanger family 57 414 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi6g0776 780 Gene3D - 44 428 IPR038770 -
Vvi6g0776 780 Gene3D - 466 723 - -
Vvi6g0776 780 PANTHER CATION/H + ANTIPORTER 55 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0776 Vvi-Chr6 8264468 8267029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0776 56 762 Antiporter Super Family AT2G13620 38.556 2.29e-178 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0776 - - vvi:100253616 1406.35