Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0774 ATGGCAATTTCAGCAAACACCCTCTTCCTCCTGAGCCTTGCCTGCAGCACCACCATCCATATATGCAATGCCCAAATCAACATAACTTTCACAGCTGTTCTTATCTTTGGTGATTCAACCATGGATACTGGCAATAACAACTATGTCAATACACCGTTTAAGGGTAATCATATCCCTTATGGCCAAGACTTTCCAGGCAAAGTTCCTACAGGGAGGTTTTCTGATGGGAAACTGGTGCCTGATATGGTGGCCTCCTTGCTGAAGATCAAGGAGACTGTACCACCTTTCTTAGATCCAAAAATCACAGACAATGAACTAAAAACTGGAGTGACCTTCGCATCAGCTGCTTCTGGATATGATGATCTAACTTCGGTTTTATCACAGGCGATACCAGTGTCAAAGCAGCCTAAGATGTTTAAGAAGTATATAGAGAGGCTTAAGGGAGTTGTGGGGGAACTGGAGGCTATGAGGATTGTGAATGGGGCTTTGGTTGTTGTAAGCTCAGGGACTAATGACTTTTGTTTTAATTTCTATGACGTACCCTCCAGAAGGATTGAGTTCAGCAGCAATGGGTACCAGGATTTTCTGCTGAAAAAGGTAGAGGATCTTTTAAAGAAACTATATAATCTGGGTGGCCGAACAATGGTCATAGCTGGGCTTCCTCCAATGGGGTGTCTGCCAATCCAAATGAGCACACGCTTTGAGCTTCCGGGTATTTTTCGGGTCTGTTTGGAGGATCAGAATTCAGATGCTCAGTCTTATAACAGCAAACTCGAGAAATTGTTACCTCAGATACAGAACTCACTTCCTGGGAGCAAAATCTTATATGTAGATATATATACTCCATTGGATGACATGATTAATAATCCAGAAAAATACGGTTTTGTGGAAACCAAGAGAGGATGCTGCGGAACGGGGCTCGTGGAAGCAGGGCCTCTATGTAATTCACTCACTCCAGTGTGTGAAAACGCTTCCCAGTACGTGTTCTGGGATTCCATTCATCCCACCGAAGCGGCTTATAGGGTGCTTGTCGAATACTTGGAGAAGGACCTGTCAACCAAGATACATAATTCCGTCGGAGAAAAAAATTGA 1092 0.4377 MAISANTLFLLSLACSTTIHICNAQINITFTAVLIFGDSTMDTGNNNYVNTPFKGNHIPYGQDFPGKVPTGRFSDGKLVPDMVASLLKIKETVPPFLDPKITDNELKTGVTFASAASGYDDLTSVLSQAIPVSKQPKMFKKYIERLKGVVGELEAMRIVNGALVVVSSGTNDFCFNFYDVPSRRIEFSSNGYQDFLLKKVEDLLKKLYNLGGRTMVIAGLPPMGCLPIQMSTRFELPGIFRVCLEDQNSDAQSYNSKLEKLLPQIQNSLPGSKILYVDIYTPLDDMINNPEKYGFVETKRGCCGTGLVEAGPLCNSLTPVCENASQYVFWDSIHPTEAAYRVLVEYLEKDLSTKIHNSVGEKN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0774 363 Gene3D SGNH hydrolase 21 356 IPR036514 -
Vvi6g0774 363 PANTHER GDSL ESTERASE/LIPASE EXL3 22 346 - -
Vvi6g0774 363 Pfam GDSL-like Lipase/Acylhydrolase 33 347 IPR001087 GO:0016788
Vvi6g0774 363 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Vvi6g0774 363 FunFam GDSL esterase/lipase APG 22 351 - -
Vvi6g0774 363 SUPERFAMILY SGNH hydrolase 159 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0774 Vvi-Chr6 8249119 8250415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0774 11 351 Pollen Coat Proteome AT1G75910 36.047 1.97e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0774 - - vvi:104879521 731.48