Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0773 ATGGCTGAGCACGGTGAAGAGAAGCTTTTAGCTGTAGCGCGCCACATAGCCAAAACGCTGGGCCATAATGATTCGACGGCCGATGATATTCTCCAGATTTTCTCCAACTTTGACGGCAGATTTTCGCGTGACAAGTTGTCGGAGAAGATGGGTGATGGGGACCCTAGAAGCTGCGCTGCACTGGAACACACTCTGAAGTCTCTTGACCGTCAGATCTCCCAGTACGTGGCGGCAGATCAGCCCATCTGGGCGGATTCCGTCGATGCCGGAGCGTTCCTCGACGCCGTCGACGAATTAATCGCCACCCTCAGGGAGTGGCATCCGATGACTGGGGAAAAATCCGTGGCCGCGTGTTTGGATCGCGCCGAGGATTTGTTGCAGCAGGCGATGTTTCGCGTTGAGGATGAGTTCAGGTCGTTGATGGAACGGGGTGGCGAGTCGTTCGAGCTGAGTCGACCCTTAGGACCCGGCGAGTCAGCTGGTAACTACCTGTTCGATTCAGAGGATGAAGACGACGACGGAGGAATGATCGGATGCGGCGACGACCACCAGATCCCCATCGCGCACCCGATCTCCGATTATGATATCCTGATCGACGCTTTACCGTCGGTCACGATCAACGATCTGCACGAGATCGCGAAACGAATGGTTGCAGCAGGGTTCGGGAAGGAGTGTTCGCATGTTTACAGTAGTTGCAGAAGAGAGTTCTTGGAGGAAAGCATTTCTAGGTTAGGGTTACAGAAGCTGAGCATCGAAGAAATTCAGAAAATGGCGTGGTGTGATCTCGAGGACCAAATCGAGCGGTGGACCAAGGCCGCGACCGTGGCGCTTCGGATTCTTTTCCCCAGCGAACGGCGTCTCTGCGATCGAGTCTTCTTCGGCTTCTCCTCCGCAGCCAATCTCTCCTTCATGGAGGTATGCCGTGGTTCCACAATTCAGCTGTTAAATTTTGCTGACGCCGTGGCAATCGGCAGCCGATCGCCAGAACGGTTGTTCAAAGTCCTTGACGTGTTTGAAACTCTGAGAGACTTAATGCCTGAGTTTGAAGCCGTGTTCTCCGATCAGTACTGTTTGTTGCTTAGAAACGAAGCAATTACTATCTGGAGAAGGTTAGGAGAAGCGATCAGAGGAATATTAATGGAATTAGAGAATCTAATCCGGCGGGACCCTGCAAAATCGGAGGTTCCCGGCGGTGGCCTTCATCCCATCACCCGCTATGTGATGAACTACCTCCGAGCAGCTTGCCGCTCCCGACAAACTCTGGAGCAAGTCTTCAATGAAAGCATCGATGATCGAACATCATCTTCCTCATTATCAGTTCAAATGGCTTGGATAATGGAGCTGTTGGAGAGCAATCTGGAGGTGAAATCGAGGATTTACAGAGACCCTGCCTTGTGCTCTGTTTTCATGATGAATAATGGAAAATACATTGTTCAAAAGGTTAAAGACAGTGAACTGGGATTGCTCTTAGGCGACGATTGGATCCGGAAACACACTGCAAAAATCCGACAATATCAAGTGAACTATCAAAGAAGCTCATGGAATAAGGTTTTGGCAGTGTTGAAGGCAGACAATACCTCACTGGCTCCAAACCCCTCATTGAACACCATGAGAGAGAGGCTCAAGTTATTCAACTTGCATTTTGATGAGACCTGCAGGGCTCAATCTACCTGGTTCATTTTCGATGAACAGCTCAGAGAGGAGCTGAGGATTTCAGTGGTCGAGAACTTGTCTCAGGTCTACCGCAACTTCCTTGGAAGGCTCCAGAGTGTTCCAGAAGCCGGGAAGCATCCGGAGAAGCTTATCAAGTACTCTGTGGAAGAAATTGGAGCTCGGGTTAACGGCTTATTTCAGAGAGGTGGTGGTGGTGGTGGAGGAAAGTGA 1884 0.508 MAEHGEEKLLAVARHIAKTLGHNDSTADDILQIFSNFDGRFSRDKLSEKMGDGDPRSCAALEHTLKSLDRQISQYVAADQPIWADSVDAGAFLDAVDELIATLREWHPMTGEKSVAACLDRAEDLLQQAMFRVEDEFRSLMERGGESFELSRPLGPGESAGNYLFDSEDEDDDGGMIGCGDDHQIPIAHPISDYDILIDALPSVTINDLHEIAKRMVAAGFGKECSHVYSSCRREFLEESISRLGLQKLSIEEIQKMAWCDLEDQIERWTKAATVALRILFPSERRLCDRVFFGFSSAANLSFMEVCRGSTIQLLNFADAVAIGSRSPERLFKVLDVFETLRDLMPEFEAVFSDQYCLLLRNEAITIWRRLGEAIRGILMELENLIRRDPAKSEVPGGGLHPITRYVMNYLRAACRSRQTLEQVFNESIDDRTSSSSLSVQMAWIMELLESNLEVKSRIYRDPALCSVFMMNNGKYIVQKVKDSELGLLLGDDWIRKHTAKIRQYQVNYQRSSWNKVLAVLKADNTSLAPNPSLNTMRERLKLFNLHFDETCRAQSTWFIFDEQLREELRISVVENLSQVYRNFLGRLQSVPEAGKHPEKLIKYSVEEIGARVNGLFQRGGGGGGGK* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0773 627 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 617 IPR004140 GO:0000145|GO:0006887
Vvi6g0773 627 Pfam Exo70 exocyst complex subunit 267 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi6g0773 627 SUPERFAMILY Cullin repeat-like 83 617 IPR016159 -
Vvi6g0773 627 FunFam Exocyst subunit Exo70 family protein 75 622 - -
Vvi6g0773 627 Gene3D Exocyst complex component Exo70 81 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0773 Vvi-Chr6 8246925 8248808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0773 1 618 EXO70 exocyst subunit family AT5G58430 71.729 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0773 K07195 - vvi:100255378 1205.28