Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0769 ATGGTGAAAATTGATCCCAAAGCTCGGGACCTGGTTTCGTGCCGAACCACCGTCAACAAGCATCGATCTATCGGGATATTCTATGGGGAGAATCCTCTGCAGACCCCTTTTTCACTGCTCTTATTGGAGATGTCCCTCGTCATCCTCCTCAGTCGTCTCGTTCGCTTTCTTCTCAAGCCTCTGAGGCAGCCTAGAGTTGTCTCTGATGTTATTGGTGGTATAATCGTGGGACCGACGGTTCTGGGGCGCAGCAGGACGTTCGCGAGGAAGATGTTTTCGGATGAAGGAAGCTTTTTGGTGCACAATTTGGGAGTACTGGGTTTCATATATTTCCTATTCATATCAGGAGTGAAAATGGATCTTTCTATGTTGAAGGGTTCGGGAAGGAAGCATGTAATGATAGCTGTATGTGGAGCGATTACTCCCCTGGTATCGGTCACTCTAGTGGCGCTTCTCTTCCGGACACGGTTAGATCACGAGCTTGAGAAGGGTTCATCGATATGGGGGGTTGCTGCAAGTATGTCCATAACAGCATTTCCTGTGCTCTACCCTATCCTGAGAGAGCAGAACCTGCTGAGTTCGGAGATAGGACGAATGGCATTGTCCGTCTCAATCATAACCGACGCACTAGGGATCACTTTTGTGATAGCTTTTGAGGCTGCAAAACAAGGGGAATCCAGGAGCAAGGCTGCTCTGTGGCATTTGGTTTCCTTGTTTGGATTTATAGGGTTTACAACGACTGTTGTTCGGAGAGCCATGACTTGGGTCATTCGCAGAACACCAGAGGGGAAACCAGTGGCACAGGTCTACATAATTTTTATTTTGCTGGGGGTGATGGTGATGGCGTTTTTGTCTGACTTCTTCGGTGCAGCCATTGCGAATGGGCCGCTGTGGCTGGGGCTGGCAATACCCGATGGTCCGCCGCTGGGAGCCACCATAGTCGACAAATGCGAAACTATCATGATGGAGCTTTTCATGCCCTTTGCATACGCATCAGTGGGGCTCTACGTGGATCTATTTAGCTTGAGTGACTACTGGTCGGCTCTGTCCCCCCTGTTTATCATGGTCATCACCGGATTTGCAGCCAAACTGCTTTCGACTCTACTCACTGCTCATTTCCTTGAAATGCCGTTTAGAGATAGCCTCACTCTTAGTCTCATTATGAGCTTTAGAGGCCAAGTAGAGTACCTGTTATACCTGCATTGGGTAGACCTTAAGATGGTGAGGCTGCCAGGTTTCACGTTGATGGTGCTGTTAAGTACTGTACTAACTGCAGTGGCCACACCTTTGGTCAGTACTCTCTATAATCCGACAAGGCCATACATGGTTAATAAGAGGCGAACCATCCAGCATACTGCTCCAAACGCTGAACTCCATTTGGTAGCTTGCATCCATGACCAGGAAAACGTGGCTTGGCTGATTAATCTTCTTGAAGTATCAAATCCAACATTGAGTAGCCCCGTTGTGGTTTATGCTCTCCGCCTGGTTGAGCTCCTTGGCCGGGCTTCACCCATCTTTATAGACCATGAAAAACATGAGAAGCAGTATGGAGAGAATACCAGCTACGCCACCGTCCACAGCGCCCTAAAGCTCTATCAGGAAACCAGAGGCGATTATGTCAGGATCCATCCCTTCACAGCTGTGTCCCCCCGACGAAGCATGTACCAAGACATATGTGAGCTCGCTCTCGTGAATAAAGCTAGTCTCATTATCCTGCCCTTCCATGCCGAAGGCATTGATATCAATGGCAATATTTCGCACATGGTCAACTCATGTATCTTGGCCCATGCACCTTGCTCTGTTGCAATCCTTGTAGACAAGGGTCCTCAAAGAAACCAATGTGTGACACGCTCCTTCCGGGCCTCATCCCGTCATTTTGCAGTTTTATTTTTAGGAGGAGCTGATGCTCGAGAGGCCCTTGCTTATGCAGATCGAATGGCTGGGAATCCCGATGTGTCTCTTACAGTAGTACGGTTCCTTACCGAAAATTATGAAAGAGATGATGGATTAGAGAAGAAGCTTGATGATGGGTTGGTGACATGGTTTTGGGTGAAGAATGAGGCAAATGAGCAGGTGATTTACAAAGAGGTCGTGGTGAGGAATGGAGAAGAAACAGTGAGCGCCATTCAGGCTATGAACAACGATGCCTATGATCTTTGGATCATGGGGAGGAAACATGGGATCAATCCGGTGCTCCTCGAAGGATTATCAAATTGGAGTGAGAATCAAGAATTGGGAGTGATTGGAGACTACATTGCTTCCATGGATTTCAGTAGTACAGCTTCTGTATTGGTATTGCAACAACAGGTATTAAGAGGGCAAAGGATGCCTGCATCCCATAGTATATGTTAG 2352 0.4787 MVKIDPKARDLVSCRTTVNKHRSIGIFYGENPLQTPFSLLLLEMSLVILLSRLVRFLLKPLRQPRVVSDVIGGIIVGPTVLGRSRTFARKMFSDEGSFLVHNLGVLGFIYFLFISGVKMDLSMLKGSGRKHVMIAVCGAITPLVSVTLVALLFRTRLDHELEKGSSIWGVAASMSITAFPVLYPILREQNLLSSEIGRMALSVSIITDALGITFVIAFEAAKQGESRSKAALWHLVSLFGFIGFTTTVVRRAMTWVIRRTPEGKPVAQVYIIFILLGVMVMAFLSDFFGAAIANGPLWLGLAIPDGPPLGATIVDKCETIMMELFMPFAYASVGLYVDLFSLSDYWSALSPLFIMVITGFAAKLLSTLLTAHFLEMPFRDSLTLSLIMSFRGQVEYLLYLHWVDLKMVRLPGFTLMVLLSTVLTAVATPLVSTLYNPTRPYMVNKRRTIQHTAPNAELHLVACIHDQENVAWLINLLEVSNPTLSSPVVVYALRLVELLGRASPIFIDHEKHEKQYGENTSYATVHSALKLYQETRGDYVRIHPFTAVSPRRSMYQDICELALVNKASLIILPFHAEGIDINGNISHMVNSCILAHAPCSVAILVDKGPQRNQCVTRSFRASSRHFAVLFLGGADAREALAYADRMAGNPDVSLTVVRFLTENYERDDGLEKKLDDGLVTWFWVKNEANEQVIYKEVVVRNGEETVSAIQAMNNDAYDLWIMGRKHGINPVLLEGLSNWSENQELGVIGDYIASMDFSSTASVLVLQQQVLRGQRMPASHSIC* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0769 783 Gene3D - 38 440 IPR038770 -
Vvi6g0769 783 PANTHER CATION/H + ANTIPORTER 22 769 - -
Vvi6g0769 783 Gene3D - 451 740 - -
Vvi6g0769 783 FunFam Cation/H(+) antiporter 24 38 442 - -
Vvi6g0769 783 Pfam Sodium/hydrogen exchanger family 46 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0769 Vvi-Chr6 8163557 8166095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0769 12 775 Antiporter Super Family AT5G37060 46.883 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0769 - - vvi:100267213 1509.2