Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0755 ATGGTAACATCACTCGTGTTTCTACTTCTTCAAGAGATGAAACTGAATCTCTGGGAGATACATTCTAGAAAGCCTCAGATATATCAAACTCGCATCTCTGAGGAATTCAGGGAATCAAAACGTTTGGTTCTTATCACATCCGATGTTTCAGCTCATGGTATTAATTATCCTGATGTTACTTTGGTCATTCAGATGGGTATTCCTTCTGATCAAGAAAAATATATACACCATCTTGGAAGAACTGGACGAGAAGGCAAAGAAGGTGAAGACATCTTGTTGGTTGCACCATGGGAAGAATATTTCCTGGATGAAATAAAAGACCTGCCTATTGAGAAATTTCCTTTACCATTATTGGATCCAGACTTAAAGCTCAAGGTGGGCTGCCACTTATCGGAAGGATCATGGTTGGGATTTTTTTGGTTGAGAGATATGGCTCATTGGAGACCAAAGTGGAAACGACTGAATTTACCAAAAATAAAATAA 483 0.3851 MVTSLVFLLLQEMKLNLWEIHSRKPQIYQTRISEEFRESKRLVLITSDVSAHGINYPDVTLVIQMGIPSDQEKYIHHLGRTGREGKEGEDILLVAPWEEYFLDEIKDLPIEKFPLPLLDPDLKLKVGCHLSEGSWLGFFWLRDMAHWRPKWKRLNLPKIK* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0755 160 Pfam Helicase conserved C-terminal domain 9 84 IPR001650 -
Vvi6g0755 160 CDD SF2_C_DEAD 6 94 - -
Vvi6g0755 160 Gene3D - 2 128 IPR027417 -
Vvi6g0755 160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 112 IPR027417 -
Vvi6g0755 160 PANTHER RNA HELICASE 7 113 - -
Vvi6g0755 160 SMART helicmild6 4 85 IPR001650 -
Vvi6g0755 160 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 121 IPR001650 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0755 10 111 Eukaryotic Initiation Factors Gene Family AT3G19760 33.636 1.99e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0755 - - vvi:100254793 230.335