Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0750 ATGATGAGGTACAACTCTTTGTTAATTAGCCCAAAGAAGGAAGAGCAGCAAGTGCCAGACACCATCCTCACCAAATTCTCTGATGCCAAACAGGTTTACGGCCATGAAGACATGGATATTATGGAACTGGAGGGCTTTCTGGGCATTGATGAAGAAGACGAAGAAAAGATTCCAGGAAAAAGTATGTGCGGTGCTGGTCACCTTAATTGGGACTTCATGGACTGGGAAGAAGAATTCCCAGTTGGAGAAGAAGAAGATGAGCAACTAGGAGAGCAGAAGTTCAACGAAGAAAACCATTATGGGAAAGTCATAAAAAGAGAGGATTTTGGGTCTGGGGATGGTGATGAGAAGATGATGTCTCTGAACTTAAACTTGAACTATCAAGAAGTCTTAGAAGCCTGGTCCGATCGTGGGTCTCTTTGGGCTGATGATTGCTCTCTTTCCTTCAAAAACACTAGCTATATGGGAGAGGTGCCCGTAATGGAAGAAGAGAAAACCAGAAGAGAAGCCAGTGTTCTCAGATACAAAGAGAAGCGCCAAACCAGATTGTTCTCCAAGAAGATAAGATATCAAGTGCGCAAACTCAATGCAGATAAAAGACCCAGACTCAAGGGTCGATTTGTGAAGAGGGTTCCAGAGAAGATGCTGAAAACATGA 657 0.4353 MMRYNSLLISPKKEEQQVPDTILTKFSDAKQVYGHEDMDIMELEGFLGIDEEDEEKIPGKSMCGAGHLNWDFMDWEEEFPVGEEEDEQLGEQKFNEENHYGKVIKREDFGSGDGDEKMMSLNLNLNYQEVLEAWSDRGSLWADDCSLSFKNTSYMGEVPVMEEEKTRREASVLRYKEKRQTRLFSKKIRYQVRKLNADKRPRLKGRFVKRVPEKMLKT* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0750 218 Pfam CCT motif 168 210 IPR010402 GO:0005515
Vvi6g0750 218 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 35 212 - -
Vvi6g0750 218 ProSiteProfiles CCT domain profile. 168 210 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0750 Vvi-Chr6 7975637 7976703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0750 4 211 C2C2-CO-like Transcription Factor Family AT1G73870 34.091 2.68e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vvi6g0750 CCT 5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0750 - - vvi:100241511 444.121