Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0741 ATGTCGAGTGAGAGTGGAAGTGTGACTCGGAGTGAGGTGGTGTGCGTCACCGGCGGCAGCGGCTATATCGGTTCCTGGCTGGTCTGTCTCCTTCTCCGCCGTGGCTACACCGTCCACGCCACCGTCAAAAATCTCAAGGATGAAAGGGAAACGAAGCATCTAGAAGCCCTAGAGGGGGCAGACTCCCGTCTCCGTCTCTTCCAGATTGATGTCCTCGACTACGACTCCATCGTCGCTGCCGTTAATGGCGCCGCCGGTGTCTTCCACCTCGCCTCCCCCTGCATCGTCGATCAGGTTCAGGATCCCGAGAAGGAACTTCTAGATCCGGCAATTAAAGGGACAAACAATGTCTTAACAGCAGCTAAGGAGCTGGGGGTTGGGCGTGTGGTGGTGACATCATCTATCTCGGCTATCATTCCTAGCCCAAACTGGCCAGCTGATGTTGTCAAAGGGGAGGATTGCTGGACTGATACCGAGTACTGCAAGCAGAAAGGAATATGGTATCCACTTTCAAAGACACTGGCTGAAAAAGCAGCTTGGGAATTTGCCAAGGAGAAAGGTTTGGATGTGGTTGTGGTGAATCCTGGCACTGTGATGGGCCCTATTCTTCCCCCAGGGCTCAATGCAAGCATGTTAATGATTCTTCGCCTTCTCCAAGGGTGCACTGACATATACGAGGACTTTTTTATGGGATCTGTTCATGTTAAAGACGTAGCCCTAGCACATATTTTGGTGTATGAGAACAAATCAGCATCTGGAAGGCACTTGTGTGTTGAAGCTATTTCTCATTATGGTGACTTTGCAGCCAAGGTTGCAGAACTTTACCCTGAATACAAAGTGCCCAGGTTGCCAAAGGATACTCAACCTGGTTTGCTAAGGGCCAAGACTGCATCTAAGAAGCTGATGGACTTGGGTCTACAATTCATTCCCATGGAGCAAATTATCAAAGATTCTGTTGAGAGTCTCCGGAGCAAAGGGTTTATTTCTTGA 990 0.499 MSSESGSVTRSEVVCVTGGSGYIGSWLVCLLLRRGYTVHATVKNLKDERETKHLEALEGADSRLRLFQIDVLDYDSIVAAVNGAAGVFHLASPCIVDQVQDPEKELLDPAIKGTNNVLTAAKELGVGRVVVTSSISAIIPSPNWPADVVKGEDCWTDTEYCKQKGIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPILPPGLNASMLMILRLLQGCTDIYEDFFMGSVHVKDVALAHILVYENKSASGRHLCVEAISHYGDFAAKVAELYPEYKVPRLPKDTQPGLLRAKTASKKLMDLGLQFIPMEQIIKDSVESLRSKGFIS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0741 329 CDD FR_SDR_e 14 306 - -
Vvi6g0741 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 319 - -
Vvi6g0741 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 323 IPR036291 -
Vvi6g0741 329 FunFam Cinnamoyl-CoA reductase 1 7 329 - -
Vvi6g0741 329 Pfam NAD dependent epimerase/dehydratase family 14 253 IPR001509 -
Vvi6g0741 329 Gene3D - 4 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0741 Vvi-Chr6 7898295 7902326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0741 12 329 Monolignol Biosynthesis Gene Families AT5G58490 77.358 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0741 - - vvi:100253488 652.899