Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0735 ATGGCTGCAGCTCTCGAGTGTTGGTCCAGCCGAGCTAGCACAGACGAGGACATGGTGGAACAAGTCCTGATGAGAACTCAGGACAGATCGGAGGGTCTGCCGGAGAATTCGTCCGGTGCAGGAGTCAAGGAGTCGTCGGCGATGCAGAAGAGGTTGCAGAGGCTGAGTAGAAATGTGTCCGAGGCTATTGCATCGCTGAAGAACTCACTGAATCTGGACTCGCCCCGTGATCCACCTGCTTCTAAGATCGAGAGCTGTCGCAAGCTTGTGTGGGGCGGTGTTGTTCGGAACCTCACGCAACTGTACCCTGGTAGTCAGCTACCGGAGAAGCTCGTCTCCAATATTCGCAAGCATTATGATTCCTTGCCTCTCAGTTATGCCCAGGCTGGATTCGATATGAAAGATGTCTTTCTTCATATTAGAATGATCGAGCAAGCATCCGTGGATGACCATCCTGCGATTTTGATTCAAGAAGTGTCTGATGATGAGATTCAAGGTTCTGTTTTCAAGCTCACTTTTGCCTGTAACTCTTCGATTTCATGGCCAGCCATGTCCGGTGCACTTGATAGTGCTTCCATTTGTTGCAAGAAGATACAGATCTTTGAGAAGAAAGGATTTACTTTAGGAATTATTCTTCTTCTGGTTCAAGCTGGGCAAGAGAAATCGTTCCAGAACAGGATTGAGAATGCCCTGAAGTTTGCTATAAAGAAGTCCAAACCCACCACCGTGAAGCTTCCATTTGGCTTATGTGGCTGTCAAGAGGAAAATACTAAGGGGAGAGAGGTGGGGGAGATTGAAGAGGAAGGCGGTGAACCACACCATAGAAATGGCATTGATAATTCGAACACTAAGGTTCAGCTCCAGATGCCACTGCCAACATCATCTTTTGTTGTTTCAGTTGATGAATGGCAGACGGTCCAATCAGGTGGAGAGGAAATTGGGAAATGGTTGTTGAACTCAGATAATCTTGAATTTGTTGATCAGATTGGGCCAAATTCATTTAAAGGGGTTTACAAGGGAAAAAGGGTTGGAATCGAGAAGCTCAAGGGTTGTGACAAGGGAAATTCATATGAGTTTGAGCTCCGAAAGGATCTGTTAGAGCTGATGACATGTGGGCATAAGAACATTCTGCAATTTTTTGGTGTTTGTGTTGATGAAAATCATGGTTTATGTGTTGTGACTAAACTAATGGAAGGTGGATCAGTTCATGATGTTATCCTAAAGAACAAGAAGTTTCAGAACAAGGAAATAATAAGGATTGCTATTGATGTAGCAGAGGGGATCAAGTTCATGAATGATCATGGTGTTGCATATAGAGATCTCAACACACAAAGGGTCTTATTGGATAGACATGGGAATGCTTGCCTGGGGGACATGGGTATAGTCACTGCTTGCAAGAGTGTTGGTGAGGCAATGGAGTATGAAACTGATGGCTATCGGTGGCTAGCTCCTGAGATCATTGCAGGTGATCCAGAGAGTGTTACAGAGACATTGATGAGTAATGTGTATAGCTTTGGGATGGTACTTTGGGAGATGGTGACTGGTGAGGCAGCCTACTCGGCATATTCACCTGTGCAGGCAGCTGTTGGAATAGCTGCTTGTGGGCTTAGACCTGAAATTCCAAAGGATTGCCCACAAATCCTGAGATCTCTGATGACAAAATGCTGGAACAATTGCCCTTCCAAGCGCCCTCAGTTCTCAGAGATTCTATCGATATTGCTGCGGCCCAACAACAGCAACAATAACAACAACAACAATAGCAACAATAGTATTAGGTGA 1779 0.4536 MAAALECWSSRASTDEDMVEQVLMRTQDRSEGLPENSSGAGVKESSAMQKRLQRLSRNVSEAIASLKNSLNLDSPRDPPASKIESCRKLVWGGVVRNLTQLYPGSQLPEKLVSNIRKHYDSLPLSYAQAGFDMKDVFLHIRMIEQASVDDHPAILIQEVSDDEIQGSVFKLTFACNSSISWPAMSGALDSASICCKKIQIFEKKGFTLGIILLLVQAGQEKSFQNRIENALKFAIKKSKPTTVKLPFGLCGCQEENTKGREVGEIEEEGGEPHHRNGIDNSNTKVQLQMPLPTSSFVVSVDEWQTVQSGGEEIGKWLLNSDNLEFVDQIGPNSFKGVYKGKRVGIEKLKGCDKGNSYEFELRKDLLELMTCGHKNILQFFGVCVDENHGLCVVTKLMEGGSVHDVILKNKKFQNKEIIRIAIDVAEGIKFMNDHGVAYRDLNTQRVLLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETLMSNVYSFGMVLWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQILRSLMTKCWNNCPSKRPQFSEILSILLRPNNSNNNNNNNSNNSIR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0735 592 MobiDBLite consensus disorder prediction 30 47 - -
Vvi6g0735 592 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 146 573 - -
Vvi6g0735 592 SUPERFAMILY Protein kinase-like (PK-like) 303 573 IPR011009 -
Vvi6g0735 592 MobiDBLite consensus disorder prediction 25 47 - -
Vvi6g0735 592 Gene3D Transferase(Phosphotransferase) domain 1 316 578 - -
Vvi6g0735 592 ProSiteProfiles Protein kinase domain profile. 323 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0735 592 Pfam Protein tyrosine and serine/threonine kinase 356 572 IPR001245 GO:0004672|GO:0006468
Vvi6g0735 592 PRINTS Tyrosine kinase catalytic domain signature 430 448 IPR001245 GO:0004672|GO:0006468
Vvi6g0735 592 PRINTS Tyrosine kinase catalytic domain signature 394 407 IPR001245 GO:0004672|GO:0006468
Vvi6g0735 592 PRINTS Tyrosine kinase catalytic domain signature 544 566 IPR001245 GO:0004672|GO:0006468
Vvi6g0735 592 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0735 Vvi-Chr6 7819421 7823709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0735 315 573 MAP Kinase Kinase Kinase AT2G17700 33.333 3.58e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vvi6g0735 PK_Tyr_Ser-Thr 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0735 - - vri:117916813 1147.11