Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0726 ATGGAGGATTTGACCTGGATTTTGAACATGGGAATCAGCCAAATTCGACCCCAAAATGGGTTGGAGGATCAGAACAAGGTTGAAAGCCCTGGAAAAGAAAAAGAGGTGGTGTCTACTGAAACCGAGCAGGAGACCGAGACCCATTTGGTTCAGGAGAATCCAGATCCTGTCCCTAACAAAGGCCGCACTGCGAAAACCAAACCCAAGCGCAAGAGGCGAGTAAGTGGTGAGGAAAAGACCGTGGTGCCGGCAATGCCCTCTGCCAGACCAAGGAATGAGAGCACCGAGGGCCCAGAGGAAGGAGAAGTTCAGAATGAAACTGAGCTAGTGACTGAACCCCAGATGAACCAGGGTCGAAGCGGAGATGGAGACAAGGACCCCAAGAAGCTTCGACGAATGCTGGCTAAGAGGCAATCCGCGCAGAGAACTCGTCTTCGAAAGCGCCAGTATGCTTTGGAACTTGAGGGACAAGTGAAAGCTCTCGAAATCGAGGTTGCGATTGCTCCCACAAGGATCAAGTATTTTGATCGGCATAATTCTTCTCTGAAAATGCAAAGTAGTTTGATTGAGCAAAAAATCTCAGTCTATACTAATGAACTTGTGTCCAAAAGAGCTAAATACGAGAATCTGACACTGGAGAGGGAGATGCTGACCCAGCTTTATATGCTGCAACGCCAACGCCGTCTACAACAGTCAAGCATGGCGCCGCCGGATCCTGGGCTTCAGGCCATGAACAACATGAACTGGAACCAACCACGAGCTGGGCAGCTGGTGGGTCCTGGTCAATTGATGGGTCATGGTCAGATGGTGGGGCAAGGTGTGGACACAATGGCGAATATGAACGTGAACCAAGCTGGGCCACAGCGGTTTATCAGACCTGGGTTGCAGCCTGTGCTGAACATGAGCTTCAACCAGCCTCCAGGGACTAAGAATATGCTGAACTGCCCAAGTTTCAACAGATTGGGAATGTGA 972 0.5041 MEDLTWILNMGISQIRPQNGLEDQNKVESPGKEKEVVSTETEQETETHLVQENPDPVPNKGRTAKTKPKRKRRVSGEEKTVVPAMPSARPRNESTEGPEEGEVQNETELVTEPQMNQGRSGDGDKDPKKLRRMLAKRQSAQRTRLRKRQYALELEGQVKALEIEVAIAPTRIKYFDRHNSSLKMQSSLIEQKISVYTNELVSKRAKYENLTLEREMLTQLYMLQRQRRLQQSSMAPPDPGLQAMNNMNWNQPRAGQLVGPGQLMGHGQMVGQGVDTMANMNVNQAGPQRFIRPGLQPVLNMSFNQPPGTKNMLNCPSFNRLGM* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0726 323 MobiDBLite consensus disorder prediction 26 49 - -
Vvi6g0726 323 SUPERFAMILY Leucine zipper domain 128 183 IPR046347 GO:0003700|GO:0006355
Vvi6g0726 323 PANTHER BASIC LEUCINE ZIPPER 34 60 250 - -
Vvi6g0726 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 126 183 IPR004827 GO:0003700|GO:0006355
Vvi6g0726 323 MobiDBLite consensus disorder prediction 12 128 - -
Vvi6g0726 323 Pfam bZIP transcription factor 125 186 IPR004827 GO:0003700|GO:0006355
Vvi6g0726 323 CDD bZIP_plant_RF2 129 166 IPR044759 GO:0003700|GO:0006355
Vvi6g0726 323 SMART brlzneu 124 188 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0726 Vvi-Chr6 7722427 7723857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0726 99 207 bZIP Transcription Factor Family AT3G58120 38.793 2.00e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi6g0726 bZIP_1 3.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0726 - - vvi:109122737 605.134