Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0709 ATGGCGTGCTCGGTTGCAGTGAACAACTCCCCTGTCTTCTCTCCCTCTTCCTCTCTCTTCTGCAAAACCTCAGTCTCTTCTCCTGAAACCCTGACGCGTCACCACCATGTCTCTTCGCCCTCCTCGCCATCTTCTCCCTTTAGGCTTAGGCTTCCCAAGTCCTTGACTGGGCTGAGGCCCTGCAAGGAGGGGCCTGCTTCTTCTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTTCGGCTTCGGCGTCTTCGCCCACGGTTTTGAAGCGAAAGAGGCCCGCGAGGTTGGATATTCCGATTGCGTCGTTGAGTTTTCCGGCGCCGGTTCCGGTGGGTGAGGGGTGTAGGGAGGCGGTGGAGGATGAGAGAGACGGGTATTATTCCGTGTATTGCAAGAGGGGGAGGAGAGAAGCTATGGAGGATCGCTACTCGGCTGTGGTTGACCTTCAAGGAGACCACAAACAGGCTTTCTTTGGTATTTTTGATGGGCATGGTGGTGCAAAAGCTGCTGAATTTGCAGCACAAAATTTGAAAAACAACATCTTAGATGAAGTGGTGAGAAGAGGTGACGATGAAATTGAAGAGTCAGTAAAACACGGTTACTTGAACACGGATTCTGATTTTCTAAAGGAGGATCTCCGCGGTGGATCATGCTGTGTGACAGCTTTGATCCGGAATGGCAAACTTGCTGTGTCAAATGCTGGTGACTGTCGCGCTGTTATGAGCAGAGGGGGAATTGCCAAGGCCCTCACTTCTGATCATCGGCCTTCGAGAGAGGATGAAAAGAGCAGAATTGAAAAGCTGGATGGCTATGTTGATTGCTACCATGGTGTTTGGAGAATTCAGGGATCTTTGGCTGTATCCCGAGGAATTGGCGATCGTCATCTTAAGCAGTGGGTAACTGCAGAGCCAGAGACAAAAATCCTTGCAATTCAACCTGACTATGAGTTCTTAATCCTTGCTTCTGATGGATTGTGGGATAAGGTTACTAACCAAGAAGCAGTGGACATTTCTCGTCCTTTTTGCATCGGTGTTGATAAGCCAGATCCTTTGTTTGCCTGTAAAAAGCTCGTAGACCTCTCTGTTTCACGAGGCTCAACTGATGATATCAGTGTGATGCTAATTCGGTTGGGCCAGTATATCTGA 1146 0.4956 MACSVAVNNSPVFSPSSSLFCKTSVSSPETLTRHHHVSSPSSPSSPFRLRLPKSLTGLRPCKEGPASSSSSSAAAAAASASASSPTVLKRKRPARLDIPIASLSFPAPVPVGEGCREAVEDERDGYYSVYCKRGRREAMEDRYSAVVDLQGDHKQAFFGIFDGHGGAKAAEFAAQNLKNNILDEVVRRGDDEIEESVKHGYLNTDSDFLKEDLRGGSCCVTALIRNGKLAVSNAGDCRAVMSRGGIAKALTSDHRPSREDEKSRIEKLDGYVDCYHGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKILAIQPDYEFLILASDGLWDKVTNQEAVDISRPFCIGVDKPDPLFACKKLVDLSVSRGSTDDISVMLIRLGQYI* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0709 381 ProSiteProfiles PPM-type phosphatase domain profile. 126 377 IPR001932 -
Vvi6g0709 381 SUPERFAMILY PP2C-like 126 378 IPR036457 -
Vvi6g0709 381 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Vvi6g0709 381 SMART PP2C_4 116 375 IPR001932 -
Vvi6g0709 381 Pfam Protein phosphatase 2C 129 370 IPR001932 -
Vvi6g0709 381 PANTHER PROTEIN PHOSPHATASE 2C 81 375 IPR015655 GO:0004722|GO:0006470
Vvi6g0709 381 Gene3D - 126 380 IPR036457 -
Vvi6g0709 381 FunFam probable protein phosphatase 2C 25 118 380 - -
Vvi6g0709 381 CDD PP2Cc 126 377 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0709 Vvi-Chr6 7567183 7569118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0709 1 381 PP2C-type Phosphatase Gene Family AT2G30020 63.636 1.89e-163 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0709 K17506 - vvi:100246740 717.998