Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0675 ATGGAGGTCTCATGGGAAGCAAGTGTTACAGATTCTATCAATACGGTTTATCTTCTCTTTTCAGCTTACTTGGTCTTTGTGATGCAGCTTGGGTTTGCCATGCTCTGTGCTGGCTCAGTCCGAGCCAAGAACGCCATGAACATCATGCTCACCAATGTGGTCGACGCCGTTGTCGGCAGCATCTCCTACTACTTCTTTGGCTTCGCCTTTGCCTTTGGCTCTGGCTCCGCCTCCAACCCCTTCATTGGCACCGACTATTTCGCTCTCAAAGACATCCCTAATTCCACCTACGACTACAGCTACTTCCTCTACCAGTGGGCTTTCGCCATAGCCGTGGCTGGCATCACCAGCGGCTCCATCGCTGAACGCACCCAGTTCAGCGCCTATCTCATCTTCTCCTTCTTCCTCACTGGCTTTGTCTACCCTGTCGTGGTCCACTGGCTCTGGTCTTCCAACGGGTGGCTCAGCCCCAGCTCGAGCAACCTCCTGTTTGGTTCCGGCGCAATCGACTTCGCCGGAAGCGGCGTTGTCCATTTAGTGGGCGGAATCGCCGGATTATGGGGTGCCTTCATTGAAGGCCCACGGGTCGGGCGGTTTGATGCATTTGGTAAACCCGTACCCATGCGAGGTCACAACGCCACTCTAGTGGTGCTTGGCACATTCTTGCTGTGGTTCGGGTGGTTTGGGTTCAACCCAGGTTCATTCGACAAAATCCTCGTCTCCTACCCAACCACTACCGACCAAGGTAACTGGACCGCCGTGGGCCGCACAGCAGTGACCACAACACTGGCTGGTTCAGCTGCCGGAATTGCTACCTTGTTCGGCAGGCGACTGATAGTGGGTCACTGGGACGCACTGGATGTTTGCAATGGGGTTCTGGGTGGGTTTGTGGCCATCACATCAGGCTGCTCCGTGGTCGAGCCATGGGCTGCAATTGTATGCGGGTTCTTCTCAGCCTGGGTCCTGATTGGTCTCAACATCCTGGCCCTGAAACTCGGCTTTGATGACCCATTAGAGGCTACCCAGTTGCATGGTGGGTGTGGAGCCTGGGGTTTGATCTTCACTGGCTTGTTTGCAAAAGAGGAGTTTGTGGTTCAAGCCTATGATTCAGGGGAGAGTGGCGTGGTGAGACCATATGGGTTGTTCATGGGTGGGGGTTGGGGCTTGATCGGATGCCAGGCGGTTGAGGTTTTGGCGATCATATGCTGGGTCAGTATCACAATGGGCCCACTTTTCTACGCTCTGCATAAGCTTAAGATATTAAGGATATCCACTGAGGAGGAGGTTGCAGGGCTTGACATCTCCAGCCATGGTGGCTACGCCTACGTTGCCCACCCAGACGAGGGTCATCCTCGGTTTTATGCGGACTACATGAGGTTGCAAGATCAGAGAACTTGA 1398 0.5443 MEVSWEASVTDSINTVYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYFFGFAFAFGSGSASNPFIGTDYFALKDIPNSTYDYSYFLYQWAFAIAVAGITSGSIAERTQFSAYLIFSFFLTGFVYPVVVHWLWSSNGWLSPSSSNLLFGSGAIDFAGSGVVHLVGGIAGLWGAFIEGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPTTTDQGNWTAVGRTAVTTTLAGSAAGIATLFGRRLIVGHWDALDVCNGVLGGFVAITSGCSVVEPWAAIVCGFFSAWVLIGLNILALKLGFDDPLEATQLHGGCGAWGLIFTGLFAKEEFVVQAYDSGESGVVRPYGLFMGGGWGLIGCQAVEVLAIICWVSITMGPLFYALHKLKILRISTEEEVAGLDISSHGGYAYVAHPDEGHPRFYADYMRLQDQRT* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0675 465 SUPERFAMILY Ammonium transporter 10 423 - -
Vvi6g0675 465 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vvi6g0675 465 PANTHER AMMONIUM TRANSPORTER 10 438 - -
Vvi6g0675 465 Pfam Ammonium Transporter Family 17 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Vvi6g0675 465 NCBIfam ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vvi6g0675 465 FunFam Ammonium transporter 1 457 - -
Vvi6g0675 465 Gene3D Ammonium transporter AmtB like domains 3 459 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0675 Vvi-Chr6 7240084 7241481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0675 12 465 Inorganic Solute Cotransporters AT4G13510 67.177 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0675 K03320 - pvy:116129597 820.461