Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0671 ATGACCATGAAGATTTCAGAAAACATGTTGCTCCTTTTCTCTCAATCATCTGCAAATCAATGGCTTCTCGCCCTCGGCATACTATCTTTTCCTATCCTCTACCTGTTTCTTCTTCAAAGATGGAAGAAGAAAGGCATTGAAGGAGCTGCTAGGCTTCCTCCAAGCCCTCCAAAGCTTCCCATCATAGGCAACTTGCACCAATTAGGCAAATTGCCTCACCGCTCCCTCTCGAAACTTTCCCAAGAATTTGGCCCTGTCCTGTTACTGCAACTTGGGAGGATTCCCACCCTACTGATCTCATCGGCGGACATGGCCAAAGAAGTGTTGAAGACCCACGACATCGACTGCTGCAGTAGGGCACCCTCCCAAGGCCCCAAGAGACTTTCTTACAATTTCTTGGACATGTGCTTCTCACCGTACTCTGATTACTGGAGGGCGATGCGGAAAGTGTTCGTTCTTGAGCTTCTAAGCGCGAAAAGGGCACACTCATTGTGGCATGCGTGGGAAGTAGAGGTTAGTCATTTGATCAGTTCTCTCTCCGAGGCTTCACCAAATCCAGTTGATCTCCATGAGAAGATATTTTCTCTTATGGACGGCATCCTCAATATGTTTGCTTTTGGTAAGAATTATGGAGGAAAGCAGTTCAAGAATGAGAAGTTTCAAGATGTTCTTGTTGAGGCCATGAAAATGCTGGATAGTTTTTCTGCCGAGGACTTCTTTCCGTCTTTTGGGTGGATTATAGATGCTTTGACAGGACTTCGTGCTAGGCACAATAAGTGTTTCCGTAACCTTGATAATTACTTCCAAATGGTTGTTGATGAACATCTTGATCCCACCAGGCCAAAACCAGAACATGAAGACCTTGTTGATGTTTTGTTAGGATTGTCAAAAGATGAAAATTTTGCATTTCATCTCACCAATGACCATATCAAGGCCATTCTCCTGAATACATTTATTGGTGGAACAGACACTGGTGCAGTGACAATGGTCTGGGCGATGTCTGAGCTCATGGCAAACCCCAGAGTGATGAAGAAGGTACAAGCTGAGGTCAGGAGCTGTGTTGGAAGTAAGCCAAAAGTGGACAGAGACGATCTTGCTAAGTTGAAATACTTGAAGATGGTGGTCAAGGAAACTTTTAGAATGCATCCAGCAGCACCGCTATTGATTCCACACCGGACGAGGCAGCACTGTCAGATCAATGCCAATGGCTGCACATACGACATCTTCCCACAAACAACAATCCTAGTTAATGCATTTGCAATTGGAAGAGACCCCAATAGCTGGAAGAACCCAGATGAGTTTTACCCAGAGAGGTTTGAGGACAGTGACATCGATTTCAAAGGGCAACATTTTGAGCTATTGCCTTTTGGGGCTGGCAGAAGGATCTGTCCTGCTATAGCCATGGCAGTGTCCACTGTGGAGTTCACACTGGCCAACCTCTTGTACTGCTTTGACTGGGAGATGCCAATGGGGATGAAGACACAAGATATGGACATGGAAGAGATGGGTGGCATTACCACCCATAGGAAGACACCCCTTTGTCTCGTACCAATCAAATATGGTTGCGTGGAGTAA 1575 0.4578 MTMKISENMLLLFSQSSANQWLLALGILSFPILYLFLLQRWKKKGIEGAARLPPSPPKLPIIGNLHQLGKLPHRSLSKLSQEFGPVLLLQLGRIPTLLISSADMAKEVLKTHDIDCCSRAPSQGPKRLSYNFLDMCFSPYSDYWRAMRKVFVLELLSAKRAHSLWHAWEVEVSHLISSLSEASPNPVDLHEKIFSLMDGILNMFAFGKNYGGKQFKNEKFQDVLVEAMKMLDSFSAEDFFPSFGWIIDALTGLRARHNKCFRNLDNYFQMVVDEHLDPTRPKPEHEDLVDVLLGLSKDENFAFHLTNDHIKAILLNTFIGGTDTGAVTMVWAMSELMANPRVMKKVQAEVRSCVGSKPKVDRDDLAKLKYLKMVVKETFRMHPAAPLLIPHRTRQHCQINANGCTYDIFPQTTILVNAFAIGRDPNSWKNPDEFYPERFEDSDIDFKGQHFELLPFGAGRRICPAIAMAVSTVEFTLANLLYCFDWEMPMGMKTQDMDMEEMGGITTHRKTPLCLVPIKYGCVE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0671 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 Gene3D Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 FunFam Cytochrome P450 99A2 42 518 - -
Vvi6g0671 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 PANTHER CYTOCHROME P450 71B11-RELATED 42 518 - -
Vvi6g0671 524 Pfam Cytochrome P450 53 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 SUPERFAMILY Cytochrome P450 53 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0671 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vvi6g0671 524 CDD CYP71-like 84 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0671 Vvi-Chr6 7205213 7206911 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0671 18 520 Cytochrome P450 AT3G26300 49.310 1.09e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0671 - K13029 vvi:100262131 1075.85