Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0669 ATGGCCATGGAAATCGCAGAAGCTGTAATGGAGGTCTTTTCTCCATCTTCTGTAACAGACTGGCTTTTCACACTCAGTGTGGTCCTTCTTTCTGTCCTTTGTTTCTTTCTCGTTCAAAAATGGGGAAACAGAGCTGTATTAGAAAGAGCAACTACTCCTCCAAGCCCTCCAAAACTTCCCATCATAGGCAACTTGCACCAACTAAGCAAACTGCATCACCGCTCCCTTTGGACACTCGCCCAGAAACATGGGTCCATCATGTTTCTCCAACTAGGTAGCATTCCCACCATTGTAATCTCTTCAGCTGATATGGCTGAACAAGTCTTGAGAACCCGAGACAACTGCTGCTGCAGCAGGCCTTCGTCTCCAGGGTCAAAGCTGCTTTCTTACAATTTTCTGGACCTGGCCTTCGCCCCATACTCAGATCACTGGAAAGAGATGAGGAAGCTTTTCAATGCTAATCTTCTGAGCCCGAAGAGGGCAGAGTCGCTTTGGCATGCGAGGGAAGTAGAGGTTGGTCGCTTGATCAGCTCTATCTCCCAAGATTCACCTGTCCCAGTTGATGTGACACAGAAGGTATTCCATCTTGCGGATGGCATTCTTGGTGCTTTTGCTTTTGGAAAGAGTTATGAAGGGAAGCAGTTTCGGAACCAGAAGTTTTATGATGTTCTTGTGGAGGCTATGAGAGTATTGGAGGCTTTCTCAGCTGAGGACTTCTTCCCAACAGGAGGGTGGATCATAGATGCCATGTCTGGACTCCGAGCCAAGCGCAAGAACTGTTTCCAAAACCTTGATGGTTACTTCCAAATGGTGATTGATGATCATCTTGATCCTACCAGGCCAAAACCAGAACAAGAAGACCTGGTTGATGTCTTCATACGGCTCTTGGAAGATCCGAAAGGTCCATTTCAGTTCACCAATGATCACATCAAGGCCATGCTCATGAATACATTTCTTGGTGGCACAGACACTACCGCAATTACTTTGGACTGGACAATGTCAGAGCTCATGGCAAACCCCAGGGTGATGAACAAGTTACAAGCTGAAGTCAGGAGCTGCATTGGAAGCAAACCAAGAGTGGAAAGAGATGATCTTAACAATCTCAAGTACTTAAAAATGGTAATCAAAGAAGCTCTGAGGAAACATACACCAATCCCACTCTTAATCCCCCGTGAAACAATGGACTACTTCAAGATCCACGACAAAAGCAGCAGCAGAGAATATGACATTTACCCCGGAACAAGGATCCTAGTCAATGCATGGGGAATCGGAAGAGACCCCAAAATCTGGAAGGACCCAGATGTGTTTTACCCAGAGAGGTTTGAGGACTGTGAGATTGAGTTTTATGGGAAGCACTTTGAGCTATTGCCATTTGGGGGTGGCAAAAGGATTTGCCCTGGAGCTAACATGGGAGTCATCACCGCAGAGTTCACATTAGCAAACCTGGTCTACTGTTTTGATTGGGAACTTCCCTGTGGGATGAAGATAGAGGACCTTGGCCTTGAAGAAGAGCTGGGTGGCATCACTGCTGGCAGGAAGAAACCTCTTTGCCTTGTTGCTAGGAGATGTGGTTGCAGTTGCACTGAGCCTATGTGA 1596 0.4674 MAMEIAEAVMEVFSPSSVTDWLFTLSVVLLSVLCFFLVQKWGNRAVLERATTPPSPPKLPIIGNLHQLSKLHHRSLWTLAQKHGSIMFLQLGSIPTIVISSADMAEQVLRTRDNCCCSRPSSPGSKLLSYNFLDLAFAPYSDHWKEMRKLFNANLLSPKRAESLWHAREVEVGRLISSISQDSPVPVDVTQKVFHLADGILGAFAFGKSYEGKQFRNQKFYDVLVEAMRVLEAFSAEDFFPTGGWIIDAMSGLRAKRKNCFQNLDGYFQMVIDDHLDPTRPKPEQEDLVDVFIRLLEDPKGPFQFTNDHIKAMLMNTFLGGTDTTAITLDWTMSELMANPRVMNKLQAEVRSCIGSKPRVERDDLNNLKYLKMVIKEALRKHTPIPLLIPRETMDYFKIHDKSSSREYDIYPGTRILVNAWGIGRDPKIWKDPDVFYPERFEDCEIEFYGKHFELLPFGGGKRICPGANMGVITAEFTLANLVYCFDWELPCGMKIEDLGLEEELGGITAGRKKPLCLVARRCGCSCTEPM* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0669 531 FunFam Cytochrome P450 99A2 43 521 - -
Vvi6g0669 531 PANTHER CYTOCHROME P450 71B11-RELATED 37 521 - -
Vvi6g0669 531 Gene3D Cytochrome P450 42 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 Pfam Cytochrome P450 53 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 CDD CYP71-like 82 516 - -
Vvi6g0669 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vvi6g0669 531 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 SUPERFAMILY Cytochrome P450 53 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0669 531 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0669 Vvi-Chr6 7192216 7193925 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0669 21 519 Cytochrome P450 AT3G26300 45.527 2.56e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0669 - K13029 vvi:100257025 1075.46