Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0667 ATGGTAATCAAAGAAGCTATGAGGAAACATACACCAATCCCACTCTTAATCCCCCGTGAAACAATGGACTATTTCAAGATCCACGACAAAAGCAGCAGCAGAGAATATGACATTTATCGCGAAACAAGGATCCTAGTCAATGCATGGGGAATCGGAAGAGACCCCAAAAGCTGGAAGGACCCAGACGTGTTTTACCCAGAGAGGTTTGAGGACTGTGAGATTGAGTTTTATGGGAAGCACTTTGAGCTATTGCCATTTGGGGGTGGCAAAAGGATTTGCCCTGGGGCTAACATGGGAGTCATCACCGCAGAGTTCACATTAGCAAACCTGGTCTGCTGTTTTGATTGGGAACTTCCCTGTGGGATGAAGATAGAGGACCTTGGTCTTGAAGAAGAGCTGGGTGGCATCACTGCTAGCAGGAAGACACCTCTTTGCCTTGTTGCTAGGAGATGTGGTTGCAGTTGCACTGAGCCTATGTGA 480 0.4729 MVIKEAMRKHTPIPLLIPRETMDYFKIHDKSSSREYDIYRETRILVNAWGIGRDPKSWKDPDVFYPERFEDCEIEFYGKHFELLPFGGGKRICPGANMGVITAEFTLANLVCCFDWELPCGMKIEDLGLEEELGGITASRKTPLCLVARRCGCSCTEPM* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0667 159 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 86 95 IPR017972 GO:0005506|GO:0016705
Vvi6g0667 159 Pfam Cytochrome P450 1 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0667 159 SUPERFAMILY Cytochrome P450 1 148 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0667 159 Gene3D Cytochrome P450 1 131 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0667 159 PANTHER CYTOCHROME P450 71B11-RELATED 1 149 - -
Vvi6g0667 159 PRINTS E-class P450 group I signature 93 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0667 159 PRINTS E-class P450 group I signature 83 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0667 159 PRINTS E-class P450 group I signature 47 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0667 Vvi-Chr6 7181272 7181751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0667 1 150 Cytochrome P450 AT3G26300 53.333 1.97e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0667 - - vvi:100257025 315.079