Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0651 ATGCCGTCCATAGGAGCAGTCAGATCGGAGAGTTCCGGCGAGGTTAGGTCCGGTAGTGGTTCGACGCCTCAGAAGCGGCGATCGATATCCGGTGGCCCGATTTCTCCACCATCGCCGGTGAAATGGAAATCCCCTCGCCGATCCGTCAATGGTAGCCCAAAAACTCCTTCAAAAGAGATCGAGAAAGATTCTGATGCTAAAGCCACAAGGTTGCATAAATCACCGATGAAAAATTTGTCAGAAATTTTTCTGGATAAATCCAAATGGAATCCAGGAGATTCTAAGCAGATGAGTGCAGCGAAGGAGGCCTTGCACGTGTCAACAGTGCCTTCCACTGTTGTGTGCCGTGAAGATGAGCAGAACAGGATTATGGATTTTTGTAAGGCATGTATAGAGCATGAGAAAGCTGGGAGTTTATATGCATGCGGATGTCCAGGGACCGGAAAATCCCTGTCCATGGAAAAAGTGAGGCGAGCTCTCGTTGATTGGGCAGGACAGGCAGGTTTTCAGCCACCTGATTTGTTATCCATCAATTGTACTTCTCTAACAAATACTCAAGAGATTTTCAGCAAGATACTTGAAAAACACCAACCAAGAAAGAAAACCAAGAGCTCTACCTCGCCTTTGCAGCATCTTCGGAACATTTATTCAAAAAAGCAGCAGTCATCTGGGATGAAGATGATGCTGATAATTGCTGATGAATTGGATTATTTGATTACAAGAGACCGGACTGTGCTTCATGATCTATTCATGCTTACAACTTTACCATTCTCCAGTTGCATATTAATAGGAGTATCAAATGCTATAGATCTAGCGGATCGTTTTCTTCCAAAACTTCAGTCGTTGAATTGCAAGCCTATGGTTGTAACTTTCCGGGCTTACTCTAAGGATCAGATCCTCAAGATTCTTCAACAGAGGTTAATGGCACTTCCTTTCCCTGTCTTTCAACCACAGGCATTGGAACTTTGTGCAAGAAAAGTTGCAGCTGCATCTGGAGATATGAGGAAAGCACTTAGTGTATGCAGGAGTGTCCTTGAGATTGTAGAAGCAGAGCTGAGAGAATCCGTAAATAGCCTAAGTGTATCATCAGAGAAGGGAGCCTTTGATCAGCAAACACTTCCAGCTCTTGACTCCTTAACAAATCAGGAAATCAATATTGTGAGGGTTGACCACATGGCTACTGCTTTGTCCAAGACTTTTCGATCACCAATAGTAGACACTATACAATCTCTGCCACAGCACCAACAGATTATACTATGCTCTGCTGTGAAGCTTTTCCGTGGGGGAAAGAAGGATACAACTGTAGGGGAGCTGAATAAATCTTATGTGGACATATGCAAATCAGTTCTAGTCCCACCAATTGGAATTCTAGAACTTTCAAGTATGTGCAGGGTGTTAAGCGACCAGGTAACCTAA 1416 0.4393 MPSIGAVRSESSGEVRSGSGSTPQKRRSISGGPISPPSPVKWKSPRRSVNGSPKTPSKEIEKDSDAKATRLHKSPMKNLSEIFLDKSKWNPGDSKQMSAAKEALHVSTVPSTVVCREDEQNRIMDFCKACIEHEKAGSLYACGCPGTGKSLSMEKVRRALVDWAGQAGFQPPDLLSINCTSLTNTQEIFSKILEKHQPRKKTKSSTSPLQHLRNIYSKKQQSSGMKMMLIIADELDYLITRDRTVLHDLFMLTTLPFSSCILIGVSNAIDLADRFLPKLQSLNCKPMVVTFRAYSKDQILKILQQRLMALPFPVFQPQALELCARKVAAASGDMRKALSVCRSVLEIVEAELRESVNSLSVSSEKGAFDQQTLPALDSLTNQEINIVRVDHMATALSKTFRSPIVDTIQSLPQHQQIILCSAVKLFRGGKKDTTVGELNKSYVDICKSVLVPPIGILELSSMCRVLSDQVT* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0651 471 MobiDBLite consensus disorder prediction 56 74 - -
Vvi6g0651 471 SUPERFAMILY "Winged helix" DNA-binding domain 404 467 IPR036390 -
Vvi6g0651 471 MobiDBLite consensus disorder prediction 1 74 - -
Vvi6g0651 471 PIRSF Cdc6 7 470 IPR016314 GO:0006270|GO:0051301
Vvi6g0651 471 FunFam Cell division control protein 283 408 - -
Vvi6g0651 471 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 50 469 - -
Vvi6g0651 471 MobiDBLite consensus disorder prediction 10 31 - -
Vvi6g0651 471 Pfam AAA lid domain 317 350 IPR041083 -
Vvi6g0651 471 Gene3D - 92 284 IPR027417 -
Vvi6g0651 471 FunFam Cell division control protein 94 282 - -
Vvi6g0651 471 Pfam AAA domain 134 253 IPR003593 GO:0016887
Vvi6g0651 471 Gene3D - 285 366 - -
Vvi6g0651 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 356 IPR027417 -
Vvi6g0651 471 Pfam CDC6, C terminal winged helix domain 419 469 IPR015163 -
Vvi6g0651 471 Gene3D - 405 469 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0651 Vvi-Chr6 7085859 7091821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0651 8 469 Core DNA Replication Machinery Family AT2G29680 60.888 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0651 K02213 - vvi:100245101 907.516