Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0643 ATGGAAACTCCGTCGATCGTATTCTTTGTTGTGGCTGCAGCGTCGGCATATGTCCTCTGGTTCTATCTCCTGGCTCGGAAGCTGACCGGCCCAAAGATGTGGCCGGTGGTGGGTAGCCTTCCGGCGCTGTTCATGAACCGGAGGAGAATCCACGACTGGATCTCTGGAAACCTGAGAGAAACTGGTGGGGCTGCCACGTACCAAACATGCACCCTTGCTCTTCCTTTCTTGGCTTACAAACAGGGGTTTTATACCGTCACTTGTCACCCCAAGAACATCGAGCATATTCTCAGGACTCGGTTTGATAACTACCCCAAAGGACCAACATGGCAAACGGCTTTTCATGATCTGCTAGGGCAAGGGATTTTCAACAGTGATGGAGACACGTGGCTGATTCAACGAAAAACTGCTGCTCTGGAGTTCACCACCCGGACGCTTCGCCAAGCCATGTCTAGATGGGTGAACCGGACCATTAAGATGCGCTTATGGCGCATTTTAGAGAAGGCCGCCTCCGAGAAGTCGTCGGTGGACATGCAGGACTTGCTCCTCCGTTTGACGTTCGATAATATATGCGGACTCACCTTCGGAAAAGATCCAGAAACGCTCTCCCCCGATTTTCCAGAAAATCCGTTCTCCATGGCATTTGACTCCGCCACTGAGTCCACTCTGCAACGCTTGCTTTACCCCGGATTTCTATGGAGACTGAAGAAGTTTCTGAGAATTGGAGCGGAGAGGAGGCTCAAACAGAGCCTTAGAGTCGTTGAAAACTACATGGACGACGCCGTCGCCGCCCGCAAAGAAAGGCCATCAGATGACCTCCTATCTCGCTTCATGAAGAAGAGAGATGTCGATGGCAACGTCTTCCCAACTTCCGTCCTCCAACGCATAGCTCTCAACTTCGTCCTCGCCGGCCGCGACACCTCATCAGTCGCGCTGAGCTGGTTCTTCTGGCTCATCATGAACAACCCACGAGTCGAAGAAAAGATCACCACCGAATTATCGACAGTTCTCAGAGAAACACGCGGCGACGACCAAACCAAGTGGCTCGAAGAGCCTCTGGTCTTCGACGAAGCTGATCGGTTGATCTACCTGAAAGCGGCATTAGCCGAAACGCTGCGTTTATACCCATCCGTACCGGAGGACTTCAAGTACGTAGTATCGGACGATATTTTACCTGACGGAACCTACGTGCCGGCAGGTACGACTGTGACGTACTCTATATATTCTGTTGGGAGGATGAAAACGATATGGGGTGAGGACTGCTTGGAGTTTAAGCCGGAGCGGTGGCTCTCAACCGGCGGCGACCGTTTCGAACCGCCCAAGGATGGTTACAAGTTTGTGGCGTTCAACGCTGGACCGAGAACCTGTTTGGGGAAGGACTTGGCTTACCTGCAAATGAAGTCGGTGGCATCCGCCGTACTGTTACGCTACCGGCTGAGTCCTGTTCCCGGCCACCGGGTGGAGCAGAAGATGTCTTTGACTCTCTTCATGAAGAATGGACTGCGCGTGTACTTGCATCCACGTGGGCTTGAACCTCCTGGGGCCGCCACGTCAGCGTAG 1560 0.5321 METPSIVFFVVAAASAYVLWFYLLARKLTGPKMWPVVGSLPALFMNRRRIHDWISGNLRETGGAATYQTCTLALPFLAYKQGFYTVTCHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGQGIFNSDGDTWLIQRKTAALEFTTRTLRQAMSRWVNRTIKMRLWRILEKAASEKSSVDMQDLLLRLTFDNICGLTFGKDPETLSPDFPENPFSMAFDSATESTLQRLLYPGFLWRLKKFLRIGAERRLKQSLRVVENYMDDAVAARKERPSDDLLSRFMKKRDVDGNVFPTSVLQRIALNFVLAGRDTSSVALSWFFWLIMNNPRVEEKITTELSTVLRETRGDDQTKWLEEPLVFDEADRLIYLKAALAETLRLYPSVPEDFKYVVSDDILPDGTYVPAGTTVTYSIYSVGRMKTIWGEDCLEFKPERWLSTGGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVEQKMSLTLFMKNGLRVYLHPRGLEPPGAATSA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0643 519 CDD CYP86A 70 501 - -
Vvi6g0643 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vvi6g0643 519 PANTHER CYTOCHROME P450 20 502 - -
Vvi6g0643 519 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 SUPERFAMILY Cytochrome P450 20 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 Pfam Cytochrome P450 85 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0643 519 FunFam Cytochrome P450 22 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0643 Vvi-Chr6 7005672 7007231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0643 9 509 Cytochrome P450 AT5G58860 79.242 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0643 K15401 - vvi:100243236 1044.65