Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0597 ATGAACAGCAGTGATGAAATGCCAGGCGTGGGTGGTGAAATCGCAGCACCGCCAGGACCACCACCGCCGCCGCCCATGAACATCCACCACCACAAGCTGCACCGCGTGGTGATGCACCCCACCTTCTTCTGGGGGAAGAACGCCGAGATCCTCTTCTCCGGCTGGCCCGGCACTCGCACCGGCATGTACGTCTTGTCCCTGGTCTTCGTCTTCGTCGTCTCTGTGCTTGTTGAAATGCTCTCTCATTCCCAACTCATCAAATCCTCTACAAACAGCCTTCTTGGTGGCGCTGCCGAGACCATTATTCATGGGGTCAGGGTGGGGCTTGCCTACATGGTGATGCTTGCACTCATGTCTTTCAACGCTGGGATCTTCATTGTGGCTGTTGCTGGGCATTGTTTGGGGTTTTTCTTGTTTGGGAGTAGGGTTTTCAGGAACAAGTCTCCGGCTCCTCAGCGAAATTCAGCCCCTGATCTTCCTTCTATGAGTTGCTGA 495 0.5495 MNSSDEMPGVGGEIAAPPGPPPPPPMNIHHHKLHRVVMHPTFFWGKNAEILFSGWPGTRTGMYVLSLVFVFVVSVLVEMLSHSQLIKSSTNSLLGGAAETIIHGVRVGLAYMVMLALMSFNAGIFIVAVAGHCLGFFLFGSRVFRNKSPAPQRNSAPDLPSMSC* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0597 164 Pfam Ctr copper transporter family 97 139 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi6g0597 164 Pfam Ctr copper transporter family 41 85 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi6g0597 164 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 30 147 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi6g0597 164 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0597 Vvi-Chr6 6517054 6517548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0597 41 157 Inorganic Solute Cotransporters AT5G59030 57.500 6.90e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0597 K14686 - vvi:100258646 287.345