Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0596 ATGCACCACATGGAGATGATGATGCACATGACATTCTACTGGGGCAAGGAAGCCGAGATTCTCTTCTCTGGCTGGCCCGGAGCTCGCAGCGGCATGTACGCCTTAGCCTTGATCGTCGTCTTCGTTATGGGCATCATCGTGGAGTGGCTTTCCTATTGCCGGCTGATCAAGCCTGGGTCGACCCATGCAGCCGCAGGGCTGGTTCAGACGCTGCTGCACACTATTCGGATTGGTCTGGCGTATATGGTGATGCTGGCTCTGATGTCCTTCAATGGCGGAGTGTTTCTGGTGGCGGTGGCCGGACACGCAGTGGGGTTTTTGGTTTTCGGGAGTAGGGTTTGCAGGGGGAGTGAAATGGTGTCGTTGGAGAAGACCTCTGATCTTCCTTAA 390 0.5538 MHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSRVCRGSEMVSLEKTSDLP* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0596 129 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 116 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi6g0596 129 Pfam Ctr copper transporter family 58 109 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi6g0596 129 Pfam Ctr copper transporter family 10 54 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0596 Vvi-Chr6 6515104 6515493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0596 11 129 Inorganic Solute Cotransporters AT5G59030 57.724 1.92e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0596 K14686 - vvi:100253503 255.758