Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0595 ATGGATCACGATCACGATCACGATCACGGTCACATGCACATGTCGCCACCGCCAGCGAACTCCACCGGGATGCCACCCATGCACCACATGGAGATGATGATGCACATGACATTCTACTGGGGGAAGAAAGCCGAGATTCTCTTCTCTGGCTGGCCCGGAACACGCAGCGGCATGTACGCGTTAGCCTTGATCGTCGTCTTCGTTATGGCCATCATCGTGGAGTGGCTTTCCCATTTCCAGCTGATCAAGCCTGGGTCGACCCATGTAGCCGCAGGGGTGGTTCAGACGCTGCTGCACGCTATTCGGATGGGTCTGGAGTATATGGTGATGCTGGCTTTGATGTCCTTCAATGGCGGAATGTTTCTGGTGGCGGTGGCCGGACACGCAGTGGGGTTTTTGGTTTTTGGGAGTAGGCTTTTCAGGGGGAGTGAAACGTTGCGGCCGTCGGAGAAGGCCTTTTATCTTTCTCCAATGAGTTGCTGA 483 0.5507 MDHDHDHDHGHMHMSPPPANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFRGSETLRPSEKAFYLSPMSC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0595 160 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 27 142 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi6g0595 160 MobiDBLite consensus disorder prediction 1 20 - -
Vvi6g0595 160 Pfam Ctr copper transporter family 85 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi6g0595 160 Pfam Ctr copper transporter family 36 79 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0595 Vvi-Chr6 6511022 6511504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0595 37 160 Inorganic Solute Cotransporters AT5G59030 55.118 4.40e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0595 K14686 - vvi:100248391 299.286