Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0588 ATGGCTGAAGAAGTGAAGCTGTTTGGCATGTGGGCAAGCCCTTTTAGCCGCAGAATTGAAGTGGCCCTCAAGCTGAAAGGGATTCAGTATGAGTATATAGAAGAGGACTTGTCCAACAAGAGTCCTTCGCTTCTCAAGTATAACCCAGTCCATAAGAAAATCCCTGTGCTTTTGCATAAGGGAAAGCCAGTTGCAGAGTCACTTGTAATCCTGGAGTACATTGATGAGACCTGGAAACACAACCCCATCTTGCCTGCAGACCCTTATGAGAGGGCCATGGCACGGTTCTGGGCTAAGTTCTTAGATGAGAAGCTCTGGCCGGCAGCAAAAAAGGTTGCGTTGAGTAAGGGAGAGGAGCATAATGGACTGATTGAAGAAATCCAGGAGCATCTGAAAACTCTAGAGAGTGAGCTGAAAGAGAAGAAATTCTTTGGAGGGGAGAGTTTGGGATTTGTAGACATAGCTGCAGACATTATATTTTGGCTGCTTGTTGTCCAAGAAACTCTGGGACTCGATATCCTAACCGAAGATAAGTTTCCCGGATTGCATGAATGGTATCATAGGCTTCTTGATGATGCTGTTTTCAAGGAATGTGTGTCAATGGAGCGACTTCTTGCCTCTTTCAAAGTTCGGTTTGGAGCCTTGACTGCTTCCAAATGA 660 0.4545 MAEEVKLFGMWASPFSRRIEVALKLKGIQYEYIEEDLSNKSPSLLKYNPVHKKIPVLLHKGKPVAESLVILEYIDETWKHNPILPADPYERAMARFWAKFLDEKLWPAAKKVALSKGEEHNGLIEEIQEHLKTLESELKEKKFFGGESLGFVDIAADIIFWLLVVQETLGLDILTEDKFPGLHEWYHRLLDDAVFKECVSMERLLASFKVRFGALTASK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0588 219 Coils Coil 117 137 - -
Vvi6g0588 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 197 IPR045073 -
Vvi6g0588 219 Pfam Glutathione S-transferase, C-terminal domain 123 189 IPR004046 -
Vvi6g0588 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Vvi6g0588 219 Gene3D - 84 217 - -
Vvi6g0588 219 FunFam Tau class glutathione S-transferase 84 218 - -
Vvi6g0588 219 Gene3D Glutaredoxin 1 83 - -
Vvi6g0588 219 FunFam Glutathione S-transferase U10 1 83 - -
Vvi6g0588 219 SUPERFAMILY GST C-terminal domain-like 76 211 IPR036282 -
Vvi6g0588 219 CDD GST_N_Tau 5 78 - -
Vvi6g0588 219 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Vvi6g0588 219 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Vvi6g0588 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi6g0588 219 CDD GST_C_Tau 88 211 IPR045074 GO:0004364|GO:0006749
Vvi6g0588 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 208 IPR010987 -
Vvi6g0588 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0588 Vvi-Chr6 6487068 6487804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0588 2 202 Glutathione S-transferase Gene Family AT2G29420 56.931 1.39e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0588 K00799 - vvi:100246830 423.705