Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0583 ATGACAAGCAAGAGTCCGGTGGAGTCAGGGACACTGGTATGGTCTGATGGCACTCAAACTGTGAGGATAGCTTTGCCGATAATACAGGTTTATGTGGTGTACCTGGGTCACCTTCCTGAGAATCAGGCATACTCACCCATGGGTCAACAGTATAGTATTCTTGGAAGTGTTCTTGAGACGAGTTCTATATCGCAAGCCTTCGTGAGAAGCTATCGAAAGAGTTTCAATGGATTTGCAGCCAGGCTCACTGATAGAGAAAAAGAAAGACTAGCTAATATGGAAGACGTGGTGTCTATATTTCCAAGCAAAACTCTCCAACCTCAGACATCACGTTCTTGGGATTTCATGGGCTTCACTGAGTCCATCAGGCGAAGGCCTTTTGTTGAGAGTGATGTTATAATCGGTGTTTTTGACACTGGAATTTGGCCTGAATCAGAGAGTTTTAGTGATAAAGGTTTTGGCCCTATCCCAAGAAAATGGAGAGGAGTTTGTCAGGGAGGCAAAAATTTCACCTGCAACAATAAGCTCATTGGAGCTCGAAATTACAATGCAAAGAAAGCTCCTGATAATTATGTGAGGGATATAGATGGTCATGGAACCCACACAGCCTCAACAGCAGCTGGCAACCCAGTAACTGCAAGTTTCTTTGGGGTGGCAAAGGGAACTGCAAGAGGAGGGGTTCCATCTGCAAGGATTGCTGCATATAAGGTTTGCCATCCATCAGGATGTGAGGAAGCAGATATAATGGCTGCCTTCGATGATGCTATTGCCGATGGGGTTGACATCATTACAATTTCATTAGGCCTGGGAGGAGCAGTTGATTTCACTATTGACTCCATCGCCATTGGCGCTTTTCATGCTATGCAGAAAGGTATTTTAACCGTGAATTCTGCAGGCAACAATGGACCCAAGCGAGCAACCGCAGTAGGCGTTGCACCATGGTTACTCAGTGTAGCGGCCAGCAGCACAGATCGCAGAATCATTAGCAAAGTTATTCTTGGGGATGGAACAAGACTAACTGGTGCAGCAATTAATTCTTTCCAGTTGAGAGGAGAGAAGTTTCCTCTTGTGTATGGAAAAGATGCTACATCTAAATGTGATGCATTCAGTGCCCAATGCATATCAAAGTGTTTAGACAGTAAATTGGTGAAGGGAAAGATTGTAGTATGTCAAGCCTTCTGGGGTTTGCAGGAAGCTTTCAAGGCTGGTGCCGTTGGGGCAATTTTGCTGAATGACTTCCAAACTGATGTTTCTTTTATTGTCCCCTTGCCTGCATCAGCTTTAAGACCGAAGCGTTTTAACAAGCTGTTGTCATACATCAATTCAACAAAATCGCCTGAAGCAACCATATTGAGAAGTGTGAGTAGAAAAGATGCCTCTGCTCCTGTTGTTGCTCAGTTTTCATCGAGAGGCCCTAATATCATTTTGCCTGAAATTCTGAAGCCTGATATAAGTGCCCCAGGAGTAGATATCCTGGCAGCATTCTCCCCACTCGCTTCCCCCTCAGAGATCAGTGGAGACAAAAGGGCAGCTAGATACAATATAATATCAGGAACCTCTATGGCCTGTCCCCATGTTGCTGGAGTGGCTGCCTACGTTAAGACTTTCCACCCTAACTGGTCTCCTTCAGCCATCCAATCCGCTCTTATGACTACAGCATGGAGGATGAATGCTACCAGAACCCCAGATGGCGAACTCGCTTATGGATCTGGGCATGTAAATCCAGTAAAAGCCATAAGTCCTGGTTTAATATACCATGCCCATAAACAAGACTACGTTAATATGCTATGCGGCATGGGCTATGATTCAAAAAATATGAGACTCATAACAGGAGAAAACAGCCAATGTCCCAAGAACAGTACATTCTCAGCAAAGGATCTCAATTATCCTTCCATGGCAGTTAAAGTTCCACCAAATAAGCCTTTCAAAGTCGAGTTCCCTAGGAGAGTTAAAAATGTTGGCCCTGCGCCGTCCATATACAAAGCAGAAGTCACCACAACAAGCCCACGACTCAAGGTGCGCGTGATTCCTAATGTTCTCTCTTTCCGGTCATTATATGAGGAGAAACACTTTGTTGTGAGTGTTGTTGGCAAAGGATTGGAATTAATGGAGTCTGCTTCGCTGGTGTGGTCCGATGGTAGGCATCTGGTGAAGAGTCCCATTGTTGTGTATACAGATAATGATTTGCCTTCAGATTAG 2199 0.4479 MTSKSPVESGTLVWSDGTQTVRIALPIIQVYVVYLGHLPENQAYSPMGQQYSILGSVLETSSISQAFVRSYRKSFNGFAARLTDREKERLANMEDVVSIFPSKTLQPQTSRSWDFMGFTESIRRRPFVESDVIIGVFDTGIWPESESFSDKGFGPIPRKWRGVCQGGKNFTCNNKLIGARNYNAKKAPDNYVRDIDGHGTHTASTAAGNPVTASFFGVAKGTARGGVPSARIAAYKVCHPSGCEEADIMAAFDDAIADGVDIITISLGLGGAVDFTIDSIAIGAFHAMQKGILTVNSAGNNGPKRATAVGVAPWLLSVAASSTDRRIISKVILGDGTRLTGAAINSFQLRGEKFPLVYGKDATSKCDAFSAQCISKCLDSKLVKGKIVVCQAFWGLQEAFKAGAVGAILLNDFQTDVSFIVPLPASALRPKRFNKLLSYINSTKSPEATILRSVSRKDASAPVVAQFSSRGPNIILPEILKPDISAPGVDILAAFSPLASPSEISGDKRAARYNIISGTSMACPHVAGVAAYVKTFHPNWSPSAIQSALMTTAWRMNATRTPDGELAYGSGHVNPVKAISPGLIYHAHKQDYVNMLCGMGYDSKNMRLITGENSQCPKNSTFSAKDLNYPSMAVKVPPNKPFKVEFPRRVKNVGPAPSIYKAEVTTTSPRLKVRVIPNVLSFRSLYEEKHFVVSVVGKGLELMESASLVWSDGRHLVKSPIVVYTDNDLPSD* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0583 732 ProSitePatterns Serine proteases, subtilase family, serine active site. 518 528 IPR023828 -
Vvi6g0583 732 FunFam Subtilisin-like protease SBT1.5 131 334 - -
Vvi6g0583 732 CDD PA_subtilisin_like 331 450 - -
Vvi6g0583 732 SUPERFAMILY Subtilisin-like 113 579 IPR036852 GO:0004252|GO:0006508
Vvi6g0583 732 Pfam Peptidase inhibitor I9 30 106 IPR010259 -
Vvi6g0583 732 Pfam Subtilase family 130 557 IPR000209 GO:0006508|GO:0008236
Vvi6g0583 732 Gene3D Peptidase S8/S53 domain 131 592 IPR036852 GO:0004252|GO:0006508
Vvi6g0583 732 Pfam PA domain 354 414 IPR003137 -
Vvi6g0583 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 723 IPR045051 -
Vvi6g0583 732 Gene3D - 324 457 - -
Vvi6g0583 732 PRINTS Subtilisin serine protease family (S8) signature 517 533 IPR015500 -
Vvi6g0583 732 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Vvi6g0583 732 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Vvi6g0583 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 107 IPR037045 -
Vvi6g0583 732 Pfam Fibronectin type-III domain 626 723 IPR041469 -
Vvi6g0583 732 CDD Peptidases_S8_3 105 554 IPR034197 -
Vvi6g0583 732 ProSiteProfiles Serine proteases, subtilase domain profile. 112 579 - -
Vvi6g0583 732 Gene3D - 596 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0583 Vvi-Chr6 6447532 6460996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0583 29 724 Subtilisin-like Serine Gene Family AT3G46850 57.183 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0583 - - vvi:100241625 1354.35