Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0582 ATGGGATTCTCTGAAACTGCAAGGCGAAAACCTGCTCTTGAGAGTGATGTTATAATTGGGGTCTTTGACACTGGAATCTGGCCTGAATCACAGAGCTTTAGTGATAAAGATTTTGGTCCACTTCCAAGAAAATGGAAAGGTGTTTGTTCAGGTGGCGAAAGTTTTACTTGCAACAAGAAGGTTATCGGAGCTCGAATCTACAATTCGCTGAATGATACTTTCGATAATGAGGTGAGGGACATAGATGGTCATGGATCCCACACTGCCTCAATAGCTGCTGGCAACAATGTAGAGAATGCGAGTTTTCATGGCTTAGCACAAGGAAAGGCAAGAGGAGGGGTTCCCTCTGCAAGGCTTGCTATATACAAAGTCTGTGTTTTGATAGGGTGCGGAAGCGCGGACATTTTGGCTGCCTTTGATGATGCTATTGCAGATGGGGTTGACATCATTTCAATTTCCCTTGGATTTGAAGCTGCAGTTGCTTTGGAAGAGGATCCCATAGCAATTGGTGCTTTTCATGCCATGGCCAGAAGTATTTTAACTGTGAATTCTGGAGGAAATAGAGGTCCGGAAGTATACTCTATAAATAGTGTTGCACCATGGATGGTCAGTGTGGCAGCAAGCACCACTGATCGCAAAATTATTGACAGGGTGGTTCTTGGCAATGGAAAAGAACTAACAGGTCGTTCATTTAATTATTTCACGATGAATGGATCCATGTACCCTATGATATACGGAAATGATTCTAGCCTCAAAGATGCCTGTAATGAATTCCTATCCAAGGTGTGCGTGAAGGATTGTTTAAATAGTAGTGCAGTGAAAGGAAAAATTCTACTATGCGATAGCACTCATGGAGATGACGGTGCTCACTGGGCTGGTGCCTCCGGAACAATCACATGGGATAATTCTGGTGTTGCTTCTGTCTTCCCCTTACCTACAATAGCTCTAAATGACAGTGACTTGCAAATCGTCCATTCCTACTACAAGTCCACAAAGTGA 999 0.4344 MGFSETARRKPALESDVIIGVFDTGIWPESQSFSDKDFGPLPRKWKGVCSGGESFTCNKKVIGARIYNSLNDTFDNEVRDIDGHGSHTASIAAGNNVENASFHGLAQGKARGGVPSARLAIYKVCVLIGCGSADILAAFDDAIADGVDIISISLGFEAAVALEEDPIAIGAFHAMARSILTVNSGGNRGPEVYSINSVAPWMVSVAASTTDRKIIDRVVLGNGKELTGRSFNYFTMNGSMYPMIYGNDSSLKDACNEFLSKVCVKDCLNSSAVKGKILLCDSTHGDDGAHWAGASGTITWDNSGVASVFPLPTIALNDSDLQIVHSYYKSTK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0582 332 CDD PA_subtilisin_like 218 332 - -
Vvi6g0582 332 SUPERFAMILY Subtilisin-like 12 237 IPR036852 GO:0004252|GO:0006508
Vvi6g0582 332 Pfam Subtilase family 15 215 IPR000209 GO:0006508|GO:0008236
Vvi6g0582 332 ProSiteProfiles Serine proteases, subtilase domain profile. 1 332 - -
Vvi6g0582 332 Gene3D Peptidase S8/S53 domain 16 210 IPR036852 GO:0004252|GO:0006508
Vvi6g0582 332 Gene3D - 211 332 - -
Vvi6g0582 332 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 330 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0582 Vvi-Chr6 6435229 6436892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0582 1 332 Subtilisin-like Serine Gene Family AT3G46850 54.599 7.47e-116 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0582 - - vvi:100253594 663.299