Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0579 ATGAATCAGAAGGAGAAATTTAGCAAAGATGATGGAGCAGAAAAAGTGGATGAAAGCCAATACAGGAGCCTGATTGGTTGCTTGATGAAGGTCATTGGAGCTCAACTTTACAATTCACTGAATGATCCTGATGATTCTGTGAGGGACAGAGATGGTCATGGATCTCACACTGCCTCAACAGCTGCTGGCAACAAAATAAAGGGAGCAAGCTTTTATGGGGTGGCAGAGGGATCTGCAAGAGGAGGGGTTCCCTCTGCAAGGATTGCTGTATACAAAGTTTGTTTTCAATCAGGGTGTGCAGACGCAGACATATTGGCTGCCTTCGATGATGCTATTTCCGATGGGGTTGACATCATTTCAGTTTCTCTGGGAAAACGAAGTGCTCCAAATTTGAATGAAGACTCATTGGCAATTGGCTCTTTTCATGCCATGGCCAAAGGTATTTTAACCTTGAATTCTGCAGGAAATGGCGGTCCCAATACATATTCAGTAGGAAGTGTTGCACCATGGATGGTCAGCGTAGCCGCAAGCACCACAGACCGCCAAATCATAACCAAGGTTGTTCTTGGCAATGGAACAACTTTAGCTGGTAGTTCAATTAATACTTTTGTGTTGAATGGAACCGAGTTTCCTCTTGTGTATGGAAAAGATGCAACCCGGACATGTGATGAATATGAAGCCCAGCTGTGCTCTGGGGATTGTTTGGAAAGAAGTTTAGTGGAGGGAAAAATTATACTATGTAGAAGCATCACAGGAGACAGAGATGCTCATGAAGCTGGTGCAGTTGGATCAATCTCACAAGAGTTTGATGTTCCTTCAATTGTCCCTTTTCCAATATCAACATTAAATGAGGAAGAATTTAGAATGATTGAAACTTACTACATTTCCACAAAAAATCCTAAAGCAAACATATTAAAGAGTGAATCAACCAAAGATTCTTCTGCTCCTGTAGTGGCTTCATTTTCATCAAGAGGGCCAAATACTATCATACCTGAGATTTTGAAGCCAGATATAACAGCCCCAGGAGTAGATATTTTGGCAGCATATTCCCCTGTTGCTCCAGTTACTGATGAAGCTGAAGATAAAAGGTCAGTCAAATACACCATATTATCAGGAACATCCATGTCTTGCCCCCATGTTGCTGGAATTGCTGCTTATATCAAAACCTTCCATCCCGACTGGTCTCCTTCAGCCATCCAATCTGCTCTTATAACTACAGCTTGGCCCATGAATGGTACCACATATGATGATGGTGAACTCGCGTTTGGATCTGGGCATGTTGATCCAGTAAAAGCTGTAAGTCCAGGTTTAGTGTATGAAGCCCTTAAGGCTGACTACATAAACATGATGTGCAGCATGGGCTATGATACAAAGACAGTGAGACTCGTCTCAGGAGACAACAGCAGTTGTCCTAAAGACACTAAAGGTTCCCCAAAAGATCTTAATTATCCTTCGATGGCAGTTAAAGTTGAAGAAACAAAATCCTTCAAAGTTGAATTTCCAAGGACAGTAACAAATTTTGGGAGTGCAAATTCTACATATAAAGCTACAGTCATCAACACAAATTCCCATATCAAGGTCCAAGTGAATCCTGACATCCTATCTTTCAAGTTAGAAAAAGAGAAGAAATCTTTTGTTGTGACTGTTGTTGGACAAGGACTCGACTCAATTGAGGCACCAATAGCAGCTGCATCACTGGTGTGGTCTGATGGCACTCATAGTGTGAGAAGTCCCATCGTAGCCTACATTGATAGGAATATTGGTTAA 1767 0.4188 MNQKEKFSKDDGAEKVDESQYRSLIGCLMKVIGAQLYNSLNDPDDSVRDRDGHGSHTASTAAGNKIKGASFYGVAEGSARGGVPSARIAVYKVCFQSGCADADILAAFDDAISDGVDIISVSLGKRSAPNLNEDSLAIGSFHAMAKGILTLNSAGNGGPNTYSVGSVAPWMVSVAASTTDRQIITKVVLGNGTTLAGSSINTFVLNGTEFPLVYGKDATRTCDEYEAQLCSGDCLERSLVEGKIILCRSITGDRDAHEAGAVGSISQEFDVPSIVPFPISTLNEEEFRMIETYYISTKNPKANILKSESTKDSSAPVVASFSSRGPNTIIPEILKPDITAPGVDILAAYSPVAPVTDEAEDKRSVKYTILSGTSMSCPHVAGIAAYIKTFHPDWSPSAIQSALITTAWPMNGTTYDDGELAFGSGHVDPVKAVSPGLVYEALKADYINMMCSMGYDTKTVRLVSGDNSSCPKDTKGSPKDLNYPSMAVKVEETKSFKVEFPRTVTNFGSANSTYKATVINTNSHIKVQVNPDILSFKLEKEKKSFVVTVVGQGLDSIEAPIAAASLVWSDGTHSVRSPIVAYIDRNIG* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0579 588 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 580 IPR045051 -
Vvi6g0579 588 Gene3D - 450 583 - -
Vvi6g0579 588 Pfam Subtilase family 41 417 IPR000209 GO:0006508|GO:0008236
Vvi6g0579 588 ProSitePatterns Serine proteases, subtilase family, serine active site. 372 382 IPR023828 -
Vvi6g0579 588 PRINTS Subtilisin serine protease family (S8) signature 49 62 IPR015500 -
Vvi6g0579 588 PRINTS Subtilisin serine protease family (S8) signature 371 387 IPR015500 -
Vvi6g0579 588 Gene3D Peptidase S8/S53 domain 25 446 IPR036852 GO:0004252|GO:0006508
Vvi6g0579 588 Gene3D - 180 311 - -
Vvi6g0579 588 ProSiteProfiles Serine proteases, subtilase domain profile. 1 433 - -
Vvi6g0579 588 CDD PA_subtilisin_like 187 304 - -
Vvi6g0579 588 SUPERFAMILY Subtilisin-like 27 437 IPR036852 GO:0004252|GO:0006508
Vvi6g0579 588 Pfam Fibronectin type-III domain 480 580 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0579 Vvi-Chr6 6402993 6406305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0579 27 582 Subtilisin-like Serine Gene Family AT3G46850 56.460 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0579 - - vvi:100260464 1102.43