Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0529 ATGGCCTCTGTTCCTTCCTCCAAAGCTCTCAAGTCAACCTTGCTAATCACAGCACTTTTGCTTCTAAAATTCTCCACTATCTACGCTCATGGAGGTGATGACCATGGCAACAGCGGTGATGAAGACTTGCATGAAAGAGGTTTAATTTTGGTGAAAATCTGGTGTCTAATAATCCTCTTCGTGAGCACTTTTGCAGGTGGAGTTTCCCCTTACTTCTATAGATGGAATGAGAGCTTTCTTCTGCTGGGCACGCAGTTTGCAGGCGGGGTCTTCCTGGGGACCTCTCTAATGCATTTCTTGAGCGACTCCAATGAGACTTTTGAAGAGCTCACAGCAAAAGCATACCCTTTTGCCTTCATGCTAGCATCAGCGGGTTATCTTCTCACCATGTTAGGAGATTGCATAGTGATCTTTGTTACCAAGGGTAGCGAAAGAGAGGCAAAAGTGGAAGCTGCTGAGGAGGGTGCGACAGAGGTGCCTGTGGGTCTCAACCCAGCATTCTTGCAGACAACATCTTTTGGGGACACCATGCTTCTCATCCTTGCTCTGTGTTTTCATTCAGTTTTTGAGGGCATTGCCATCGGGGTTTCAGGTACAAAGGCAGAAGCATGGAGGAACCTGTGGACAATATCATTGCACAAGATATTTGCAGCCATTGCAATGGGAATTGCACTGCTGAGGATGAAACCCAAGAGGCCATTTGTGACAACTGCGGCCTATTCTTTTGCCTTTGCGGTTTCGAGCCCCATCGGAGTGGGAATAGGCATTGCCATAGATGCCACAACCCAAGGGAAGGCAGCTGATTGGATATATGCTATATCAATGGGTCTTGCTTGTGGGGTTTTCATCTATGTTGCCATCAACCATCTCGTTGCCAAGGGCTTCAAACCACAAACTCAGCTTTATTTTGACACTCCCTTTTTCAAGTTTCTTGCTGTGCTTGCTGGGGTGGGAGTCATAGCTGTTGTTATGATTTGGGATTAG 984 0.4685 MASVPSSKALKSTLLITALLLLKFSTIYAHGGDDHGNSGDEDLHERGLILVKIWCLIILFVSTFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSLMHFLSDSNETFEELTAKAYPFAFMLASAGYLLTMLGDCIVIFVTKGSEREAKVEAAEEGATEVPVGLNPAFLQTTSFGDTMLLILALCFHSVFEGIAIGVSGTKAEAWRNLWTISLHKIFAAIAMGIALLRMKPKRPFVTTAAYSFAFAVSSPIGVGIGIAIDATTQGKAADWIYAISMGLACGVFIYVAINHLVAKGFKPQTQLYFDTPFFKFLAVLAGVGVIAVVMIWD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0529 327 PANTHER ZINC/IRON TRANSPORTER 51 322 - -
Vvi6g0529 327 Pfam ZIP Zinc transporter 176 323 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi6g0529 327 Pfam ZIP Zinc transporter 50 142 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0529 Vvi-Chr6 6012529 6013891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0529 6 327 Inorganic Solute Cotransporters AT5G59520 59.714 4.19e-139 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0529 K14709 - vvi:100255358 628.246