Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0525 ATGCACTACTTCTTCTTCTCTCCTTTGTCGGCTTCTTTTCTTTTCTTTCTTCTTCTTCTTCTCCTTCTTCTTCTGGGAACAGCTGTTGTATTCTTTTCTCTGTTGCCCTTTCGGTTTCTCCAATGGCGCCATCACCAACACAAACGTCTGCCACTGCCACCTGGTTCAATGGGCTGGCCTTATATCGGGGAGACGCTCAAGCTCTATACTGAGAACCCAAATTCCTTTTTCTCCAACAGGCAAAAACGACATGGAGATGTTTTCAAGACCAGCATACTGGGATGTCCTTGTGTGATGGTTTCAAGCCCGGAAGCTATTAAGGTTGTGCTAGTGACTCGAGCTCATCTCTTTAAGCCAACCTATCCATCAAGCAAAGAGAGAATGATAGGGCCAGAGGCTATCTTCTTTCATGAAGGGCCCTATCATTCAAGGCTCAAGAAATTGGTCCAGGCCTCTTTTCTCCCCTCTGCAATTAGAGGATCGGTCTCAGCGATAGAGCAGATTGTTCTCAAATTTCTTCCTACCTGGAACAACGGTGTCGTTAACACTCTGCAAGAGATGAAAAAATATACTTTTGATGTGGCCATCCTTTCGGCATTCGGGCACAAACTCGACTTAGAGATGGAGGGAATCAAACATCTGTATCGGAGTCTTGAGAAGGGCTATAATTCCATGCCTATAAATCTTCCAGGAACTCCCTTCCGCAGAGCCATGAAGGCGAGGCAGCTTCTCAACGAGACTTTCAGGAGATTGATAGCAAAGAGAAGGGGAAGTAGTAAACAAGGAGGTGGATTGCTGGGAATTCTTCTGGGAGCTAAGGACCAGCATCTGAATCACCTGAGCGATTCTCAAATTGCTGATAACATCATCGGAGTCATCTTTGCTGCTCATGATACCACTGCAAGTGTTCTCACATGGCTTCTCAAGTACCTACATGATAATAGAGATCTCCTCGAAGCCGTTACCAGGGAACAAGAAGGCATTAAAGCCAGCATATCAGAAGCAAATCGAGGCCTTACGTGGGATGATACTCGGCGCATGCCGCTGACCGGCCGGGTGATTCAGGAGACTTTAAGAACGGCAAGCATTCTCTCCTTCACATTCAGAGAAGCAGTCGAAGACGTAGAATTTGAAGGGTACTACATCCCCAAAGGCTGGAAGGTTCTTCCACTATTCAGAAGCATCCATTACTGTGCTGATTTCTTCCCTCAACCCGAAAAGTTTGACCCTTCGAGATTCGAGGTGCCACCAAAACCCAACACGTTCTTGCCATTTGGGAATGGCGTGCATGCCTGTCCAGGCAGTGAGCTAGCCAAGCTTGAGATGTTCGTCCTCCTCCACCACCTCACCACCTCCTACAGGTGGAAGGTGGTGGGAGGTGAAGATGGCATACAATACGTCCCATTTCCGGTGCCCCAGCGCGGCCTGCCAATAGAGGTGACCCCAAGAAAAGCAAACGCAGAATAA 1467 0.4778 MHYFFFSPLSASFLFFLLLLLLLLLGTAVVFFSLLPFRFLQWRHHQHKRLPLPPGSMGWPYIGETLKLYTENPNSFFSNRQKRHGDVFKTSILGCPCVMVSSPEAIKVVLVTRAHLFKPTYPSSKERMIGPEAIFFHEGPYHSRLKKLVQASFLPSAIRGSVSAIEQIVLKFLPTWNNGVVNTLQEMKKYTFDVAILSAFGHKLDLEMEGIKHLYRSLEKGYNSMPINLPGTPFRRAMKARQLLNETFRRLIAKRRGSSKQGGGLLGILLGAKDQHLNHLSDSQIADNIIGVIFAAHDTTASVLTWLLKYLHDNRDLLEAVTREQEGIKASISEANRGLTWDDTRRMPLTGRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRSIHYCADFFPQPEKFDPSRFEVPPKPNTFLPFGNGVHACPGSELAKLEMFVLLHHLTTSYRWKVVGGEDGIQYVPFPVPQRGLPIEVTPRKANAE* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0525 488 Gene3D Cytochrome P450 42 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 FunFam Abscisic acid 8 42 482 - -
Vvi6g0525 488 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 PANTHER CYTOCHROME P450 26 48 471 - -
Vvi6g0525 488 Pfam Cytochrome P450 53 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 CDD CYP90-like 80 482 - -
Vvi6g0525 488 SUPERFAMILY Cytochrome P450 45 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g0525 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0525 Vvi-Chr6 5973687 5977447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0525 19 455 Cytochrome P450 AT4G19230 59.725 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0525 K09843 - vvi:100260462 932.939