Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0504 ATGGGAGCCCTCCCTCAACAGCAATTCTCACCTTTATCTCAACACCTTAGCATCCTTGAGGATGCTCTAGGGGGCAGTTCACCGGAGGACTCTCTGGTAAGAAGCTACGGAAGGAGTTTCAATGGATTTGCAGCCAAGCTCACAGAACAAGAACGAGAAAAATTGGCTAGTAAGGAGGAAGTGGTGTCTGTTTTCCCAAGTGGAATCCTTCAACTTCACACCACAAGATCTTGGGATTTTATGGGTTTCCCTCAGACTGTAAAACGAGTTCCAAGTATTGAGAGTGATATTATCATCGGTGTTCTTGATACTGGTATCTGGCCTGAATCAAAAAGCTTTAGTGATGAGGGTTTGGGCCCTGTCCCAAAAAAATGGAAAGGTTCTTGTAAAGGTGGACAAAATTTCACTTGCAACAAGAAGATAATTGGAGCTCGAGTATACAACTCGATGATATCTCCGGATAATACTGCAAGAGACAGTGAGGGTCATGGAACCCACACTGCCTCCACCGCAGCCGGAAGCGTAGTAAAGGGTGCGAGTTTTTATGGAGTGGGTAAAGGAGATGCAAGAGGAGGAGTTCCTTCTGCAAGGATTGCCGTATACAAAGTGTGTTACGAAACAGGGTGCACGGTGGCAGATGTGATGGCTGCCTTCGATGATGCTATTTCTGATGGGGTTGACATAATTACGGTTTCACTTGGAGCAGCTGCAGCATTGCCTTTGGACTCCGATTCCATTGGAATTGGCGCTTTCCATGCTATGGCAAAGGGTATTTTAACCTTGAATTCTGCAGGAAATAATGGTCCTGTCCCAGTATCAGTAAGCAGCGTTGCACCATGGATGGTCAGCGTAGCAGCCAGCACCACTGATCGCAGAATCATCGGCGAGGTTGTTCTTGGAAATGGAGTTACTGTGGAGGGTATTGCCATTAATTCTTTTGAGTTGAATGGAACTAACCATCCTATTGTATATGGAAAGACCGCTAGTACATGTGATAAACAAAATGCCGAGATTTGCAGGCCCTCGTGCTTAAACGAGGATTTGTCGAAGGGAAAGATTGTGCTGTGTAAAAACAATCCACAAATATATGTAGAAGCTAGTAGGGTTGGTGCCCTTGGGACAATCACGCTAGCCCAGGAATACCAAGAAAAAGTTCCATTCATCGTCCCTGTACCCATGACAACTTTGACTCGTCCGGACTTTGAGAAGGTGGAGGCCTACATCAATTCCACAAAAAAGCCTAAAGCAAACATACTGAAAAGTGAATCCCTCAACGACACTTCTGCCCCGGTTGTGGCCTTCTTTTCATCACGAGGGCCTAACAGAATCGTACCAGATTTTTTGAAGCCAGATATAACCGCCCCCGGTGTTGATATCTTAGCTGCATTTTCCCCGATTGCTCCTATTTCGGACACTGATGAAGATGACAGGAGGGTGAACTACAATTTCTTATCAGGAACCTCCATGTCTTGCCCCCATGCTGCTGCAGTTGCTGCTTATGTCAAGTCCTTTCACCCTACCTGGTCTCCTTCCGCCATCAAATCCGCTATTATGACTACCGCCCAGAGACTGGACCCCTCCAACAACCCAGATGGCGAACTCGCCTATGGATCTGGCCATATCGATCCTGTAAAAGCTAGAAGTCCGGGTTTAGTGTACGATGCCTCCAAAGAAGACTACATTAAAATGATGTGCACCATGGGATATGACACAAATCAAGTGAGGCTCATATCAGGAGACAACAGCACTAGTTGTCCTAAGGATGGTAAAGGCTCTCCAAGGGATCTCAATTATCCTTCAATGGCAGCTAAAGTTGACCCAAAAAAGCCTTTCGCAGTGAAGTTTCCAAGGACTGTTACAAACGTTGGCTTTGCAAATTCCACTTACAAAGCAAAGATCAGAATCAGGAGTCGCCATATAAAGGTCCAAGTGAATCCTTCCACCCTCTCTTTCAAATCATTGAACGAGACAAAATCTTTTCTTGTGACTGTTACCGGAGACGGACTAAACTTCGAAAAGGATCCGACTGCGTCTGCATCGCTGGCTTGGTCCGATGGCAATCATCACGTGAGGAGTCCCATTTTCGTGTATGTACTCAAGGATGGATTTTAA 2112 0.4588 MGALPQQQFSPLSQHLSILEDALGGSSPEDSLVRSYGRSFNGFAAKLTEQEREKLASKEEVVSVFPSGILQLHTTRSWDFMGFPQTVKRVPSIESDIIIGVLDTGIWPESKSFSDEGLGPVPKKWKGSCKGGQNFTCNKKIIGARVYNSMISPDNTARDSEGHGTHTASTAAGSVVKGASFYGVGKGDARGGVPSARIAVYKVCYETGCTVADVMAAFDDAISDGVDIITVSLGAAAALPLDSDSIGIGAFHAMAKGILTLNSAGNNGPVPVSVSSVAPWMVSVAASTTDRRIIGEVVLGNGVTVEGIAINSFELNGTNHPIVYGKTASTCDKQNAEICRPSCLNEDLSKGKIVLCKNNPQIYVEASRVGALGTITLAQEYQEKVPFIVPVPMTTLTRPDFEKVEAYINSTKKPKANILKSESLNDTSAPVVAFFSSRGPNRIVPDFLKPDITAPGVDILAAFSPIAPISDTDEDDRRVNYNFLSGTSMSCPHAAAVAAYVKSFHPTWSPSAIKSAIMTTAQRLDPSNNPDGELAYGSGHIDPVKARSPGLVYDASKEDYIKMMCTMGYDTNQVRLISGDNSTSCPKDGKGSPRDLNYPSMAAKVDPKKPFAVKFPRTVTNVGFANSTYKAKIRIRSRHIKVQVNPSTLSFKSLNETKSFLVTVTGDGLNFEKDPTASASLAWSDGNHHVRSPIFVYVLKDGF* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0504 703 ProSiteProfiles Serine proteases, subtilase domain profile. 77 547 - -
Vvi6g0504 703 ProSitePatterns Serine proteases, subtilase family, serine active site. 486 496 IPR023828 -
Vvi6g0504 703 Pfam Fibronectin type-III domain 595 696 IPR041469 -
Vvi6g0504 703 SUPERFAMILY Subtilisin-like 72 551 IPR036852 GO:0004252|GO:0006508
Vvi6g0504 703 Gene3D Peptidase S8/S53 domain 96 560 IPR036852 GO:0004252|GO:0006508
Vvi6g0504 703 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Vvi6g0504 703 PRINTS Subtilisin serine protease family (S8) signature 159 172 IPR015500 -
Vvi6g0504 703 PRINTS Subtilisin serine protease family (S8) signature 485 501 IPR015500 -
Vvi6g0504 703 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 695 IPR045051 -
Vvi6g0504 703 FunFam Subtilisin-like protease SBT1.5 96 300 - -
Vvi6g0504 703 Pfam Peptidase inhibitor I9 13 73 IPR010259 -
Vvi6g0504 703 CDD Peptidases_S8_3 70 521 IPR034197 -
Vvi6g0504 703 CDD PA_subtilisin_like 297 418 - -
Vvi6g0504 703 Gene3D - 290 425 - -
Vvi6g0504 703 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Vvi6g0504 703 Gene3D - 564 699 - -
Vvi6g0504 703 Pfam Subtilase family 95 537 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0504 Vvi-Chr6 5757473 5760369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0504 1 699 Subtilisin-like Serine Gene Family AT5G59100 54.455 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0504 - - vvi:100262117 1379