Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0463 ATGGCGAGAACGCTAATCTCTTCTCCACCCTTCATCGGGAAGCCACTCCCTTCCCTCAGCTCTCGCCATGGCCTCCTACACTCTCTTCCTCACCGTAGACTCATCTCCACCAGAGTCAAATTCAGTTTACATGACCTTCCTCCTATTCACTCCTTAGATTCTTCTTCGATTGATTTTGCCGGAATTGTTAGCCGAGCTGAAAGCTTGCTCTACACTCTCGCCGACGCTGCAGTTTCTGCCGATCCGGCTGCCGCTGGACCCGCGTCAGGCACAGCTGATGCTGCAGTGCAGAAGAACGGTGGGTGGTTCGGGTTTATTTCGGAGGGTATGGAAGTTGTTTTGAAGGTTCTGGAGGATGGCCTAACAGCAGTGCATGTTCCCTATGCATATGGATTTGCGATTATATTGCTCACTGTTATCGTGAAAATTGCTACATATCCCTTGACAAAGAAGCAGGTTGAATCAACACTGGCCATGCAAAATCTTCAACCAAAGATCAAGGCCATTCAAGAAAGATATAAGGGCAATCAGGAAAGAATACAACTGGAGACATCGCGGCTTTATAAGCAAGCTGGGGTTAATCCTTTGGCAGGATGTTTCCCAACTTTGGCCACAATACCAGTCTGGATAGGTTTGTATCAAGCTCTTTCAAATGTGGCAAATGAGGGACTGTTGACAGAAGGGTTTTTTTGGATTCCCTCTTTGGGTGGGCCAACTACAATTGCTGCTCGACAAAGTGGATCTGGCATTTCTTGGCTTATTCCGTTTGTGGATGGCCATCCACCATTGGGCTGGCAAGACACTGCAGCATACCTTGTTTTACCTGTCCTCCTTGTCATTTCTCAGTATGTTTCAATGGAGCTGATGAAGCCACCTCAGACTGATGATCCATCTCAAAAGAATACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATTGGTTACTTTTCTCTATCTGTCCCATCAGGATTATCAATTTACTGGTTCACAAACAATGTACTGAGCACAGCACAACAAGTATGGTTACGCAAATTAGGTGGTGCCAAACCTGTTGTGAATGAGGATGCAAGTGGAATCATTACTGCAGGGCGTGCAAAAAGATCAGCTTCTCAGCCTGCAAGGGCTGGTGATAGGTTTAGACAACTAAAAGAAGAAGAGAAGAAGAAAAAAATAAGCAAGGCATTGCCAGCAGAAGAGATTCAGGCTCTTGCATCTGAATCTGATTCTGATGAAGGTTCAGATGAAGAGACTAAAGACAAGGGTGATGATGTTTTAGAAGAGGCATATGTTTCTAGTGGTAGCAAACAGGTTCCACAATATGCTGGACCAAGGAGAAGCAAGCGGTCAAAGCGGAAGCGTGCCGGATGA 1368 0.4576 MARTLISSPPFIGKPLPSLSSRHGLLHSLPHRRLISTRVKFSLHDLPPIHSLDSSSIDFAGIVSRAESLLYTLADAAVSADPAAAGPASGTADAAVQKNGGWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQNLQPKIKAIQERYKGNQERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNEDASGIITAGRAKRSASQPARAGDRFRQLKEEEKKKKISKALPAEEIQALASESDSDEGSDEETKDKGDDVLEEAYVSSGSKQVPQYAGPRRSKRSKRKRAG* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0463 455 CDD 5TM_YidC_Alb3 131 344 IPR047196 -
Vvi6g0463 455 Pfam 60Kd inner membrane protein 130 344 IPR028055 -
Vvi6g0463 455 NCBIfam membrane protein insertase YidC 130 343 IPR028055 -
Vvi6g0463 455 MobiDBLite consensus disorder prediction 362 455 - -
Vvi6g0463 455 MobiDBLite consensus disorder prediction 371 395 - -
Vvi6g0463 455 PANTHER OXA1 73 389 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0463 Vvi-Chr6 5407677 5415132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0463 17 400 Chloroplast and Mitochondria Gene Families AT2G28800 68.182 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0463 K03217 - vvi:100260431 808.905