Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0449 ATGAAGATGCACATTCGGAGTATCTTATCCTCCTACTTGACCAGGAAGCCAATCAGTAAAAGCCCCATCTTTAGATCTCTTGGCCAAAACCATTTCTTTACCAGCAGTACCTCCCGGTCCAATCAAGTCATCACTTGCAAGGCGGCGGTGTGTTGGGGAGCAGGGGAGGCGGTGAAGGTGGAGGAGATACAGGTAGAGCCACCCAAATCGTCTGAAGTTCGGGTTAAGATGCTGTATGCTAGTATCTGCCACACAGACATCTTATATTGCTCAGGATTTCCACTGCCTCTGTTTCCAAGAGTTCCTGGCCATGAAGGTGTTGGCATGGTGGAGAGCGTAGGCGAAAATGTGATAGCCTTGAAGGAGGGAGATCTAGTTATTCCAACCTATTTAGGGGAGTGTGGAGAATGTGAAAATTGTAGGTCAGGAAAGACCAATTTATGCCTCGAACACCCCCTAACTCTTAATGGTTTGATGCTTGATGGCACTTCCAGGATGTCTATTAGGGGCCAAAGGCTCTACCACCTTTTTAGTTGCTCCACATGGGCTGGGTATATGGTTGTGAATGCCAACTACCTTGTCAAGATTGACTCAAGAATAGCTCTGTCAGAAGCTAGCTTCCTCTCATGTGGCTTTTCCACTGGATATGGGGCAGCTTGGAAAGAGGCTAAGGTTGAAAAAGGTTCTAGTGTTGCAGTTTTAGGCCTTGGTGCTGTTGGATTAGGGGTATGTATGGTTAAAGAGTATGATATGTATATTGAATTTAAAATGCTACAAACTTAA 783 0.4559 MKMHIRSILSSYLTRKPISKSPIFRSLGQNHFFTSSTSRSNQVITCKAAVCWGAGEAVKVEEIQVEPPKSSEVRVKMLYASICHTDILYCSGFPLPLFPRVPGHEGVGMVESVGENVIALKEGDLVIPTYLGECGECENCRSGKTNLCLEHPLTLNGLMLDGTSRMSIRGQRLYHLFSCSTWAGYMVVNANYLVKIDSRIALSEASFLSCGFSTGYGAAWKEAKVEKGSSVAVLGLGAVGLGVCMVKEYDMYIEFKMLQT* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0449 260 Gene3D - 49 214 - -
Vvi6g0449 260 SUPERFAMILY GroES-like 41 226 IPR011032 -
Vvi6g0449 260 Gene3D - 215 246 - -
Vvi6g0449 260 Pfam Alcohol dehydrogenase GroES-like domain 71 196 IPR013154 -
Vvi6g0449 260 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 103 117 IPR002328 GO:0008270|GO:0016491
Vvi6g0449 260 PANTHER ALCOHOL DEHYDROGENASE 42 245 - -
Vvi6g0449 260 FunFam alcohol dehydrogenase 1-like isoform X1 54 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0449 Vvi-Chr6 5298015 5301048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0449 72 210 Monolignol Biosynthesis Gene Families AT4G37970 34.507 1.24e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0449 K00121 - vvi:100250105 359.762