Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0417 ATGAGGACTATCTTCTTCAAGGCTTCTTCGCCTTCATCCTCGCACCAATCTTCACCCTCGCGTGCGCCTTCCTCCCCGCTTCATGAGTCCATGATGGACGAGAACATCGATAACGCTCAATCAGTCATCTCCAAGTGGTACTCCGACGAGTCCTCCTTCGCCAATTTCACCTCCCTCTTTCATTCCAGCCGCAGCGAAGCCAAGCAGTTCTTAAGCGCTGTTGCGGATTTGCAACGCGCTATGCACTTCTTCGTCAACCATGATTCCACTTCAGAGAAGCTCATCCGATCTCAGAACCTCATGCAGCTCGCCATGAAGAGACTCGAGAAGGAGTTCTACCAGATTCTCTCTTCCAGTCGGGAGTACTTGGACCCCGAGTCCGTCTCCTCGCATGTATCTGCGAGGTCGAGCATCTCCGACTTTGAAGACGACCGTGCGTCGGAGGAGGAGTTCGGAGCCTCCATTGAGTCCGTTTCTGGAGTGGAGAGGGAATCGGAGTTGGCGATGGCGGATCTCAAGGCCATCGCGGATTGTATGATTTCTTCTGGTTATGGTAAGGAGTGTGTGAAGATTTACAAACTTGTGCGCAAGTCGATTGTCGATGAAAGCCTGTATCATCTTGGAGTCGAGAGATTGAGTTATTCGCAGATTCAGAAGATGGACTGGGAGTTGATCGAAAACAAAATTAGGCATTGGTTGAATGCTGTCAAGGCTGCGGTGAAAACTCTCTTCTACGGGGAGCGAATTCTCTGTGATCGTGTTTTCTCTGCATCTGATTCCATCAGAGAGTCGTGTTTCTCGGAGATTACAAAGGAAGGTGCGCTCTCTCTGTTTGGATTCCCAGAACATGTTGCCAGATGCAAGAAAACGCCCGAGAAAATGTTCAGAATACTTGATCTCTATGAATCCATCTCTGATCTCTGGCCTGAAATCGACTCGATATTTTCATTTGAGTCAACCTCCGCCGTGCTATCACAAGCAACCAGTGCTCTCATCAGGCTCGGTGAAGCCGTCAGAACAATGCTATCGGACTTCGAAGCGGCGATTCAGAAGGATTCATCCAAAACGCCAATCCGCGGCGGCGGAGTTCATCCTCTGACACGATACGTCATGAATTACGTCTCATTCCTCTCCGACTACAGCGGAGTTCTCTCTGTCATTGTCGCCGAATGGCCGCTAACAGTACAATCATCGATGCCAGAATCTTACTTTGAGAACCCGAAGTCCGACGATGATCCAACATCGGCGATTTCCTTGCGCCTAGCCTGGCTCGTGCTTGTGCTTCTCTGCAAACTCGATGGCAGGGCCAAGCTCTACAAGGACGTCTCTCTCTCATACATCTTCCTCGCTAACAATCTCCAGTACGTTACCACCAAAGTCCGTACCTCCAATATCCGATACCTCCTCGGAGATGACTGGATCGCAAAACACGAAATTAAGGTGAAACAGTACGCATCCAACTACGAACGCATGGGTTGGAGCAAAGTGTTCTCATCACTGCCGGAGAATCCATCGGCTGACATCTCGCCAGAGAAAGCGAAAGAATGCTTCAAGAAATTTAATTCCGCCTTTGAAGAAGTGTACCGGAAGCAAACATCGTGGGTCGTACCAGATAACAAGCTTCAAGAAGAAATCAAACTCTCTATTGCTAAGAAACTAGAACCGACGTATAGAGCCTTTTACGAGAAGAACCGGGCCAGGTTGAGGAGGGAACCGGGTTCGGAGTCAGTGGTGAGATTTGCACCAGACGATATGGGAAATTACTTGTCAGATCTGTTTTACGGTACCGGGGTTTCCGGTAGCACGTCGTCGTCGTCGTCTTCTTCTCCATCGTCGCTTTCGCGTGGGTGA 1851 0.497 MRTIFFKASSPSSSHQSSPSRAPSSPLHESMMDENIDNAQSVISKWYSDESSFANFTSLFHSSRSEAKQFLSAVADLQRAMHFFVNHDSTSEKLIRSQNLMQLAMKRLEKEFYQILSSSREYLDPESVSSHVSARSSISDFEDDRASEEEFGASIESVSGVERESELAMADLKAIADCMISSGYGKECVKIYKLVRKSIVDESLYHLGVERLSYSQIQKMDWELIENKIRHWLNAVKAAVKTLFYGERILCDRVFSASDSIRESCFSEITKEGALSLFGFPEHVARCKKTPEKMFRILDLYESISDLWPEIDSIFSFESTSAVLSQATSALIRLGEAVRTMLSDFEAAIQKDSSKTPIRGGGVHPLTRYVMNYVSFLSDYSGVLSVIVAEWPLTVQSSMPESYFENPKSDDDPTSAISLRLAWLVLVLLCKLDGRAKLYKDVSLSYIFLANNLQYVTTKVRTSNIRYLLGDDWIAKHEIKVKQYASNYERMGWSKVFSSLPENPSADISPEKAKECFKKFNSAFEEVYRKQTSWVVPDNKLQEEIKLSIAKKLEPTYRAFYEKNRARLRREPGSESVVRFAPDDMGNYLSDLFYGTGVSGSTSSSSSSSPSSLSRG* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0417 616 SUPERFAMILY Cullin repeat-like 64 593 IPR016159 -
Vvi6g0417 616 FunFam Exocyst subunit Exo70 family protein 53 601 - -
Vvi6g0417 616 PANTHER EXOCYST COMPLEX PROTEIN EXO70 28 594 IPR004140 GO:0000145|GO:0006887
Vvi6g0417 616 Gene3D Exocyst complex component Exo70 54 601 - -
Vvi6g0417 616 Pfam Exo70 exocyst complex subunit 231 591 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi6g0417 616 MobiDBLite consensus disorder prediction 1 25 - -
Vvi6g0417 616 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0417 Vvi-Chr6 4995459 4997309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0417 2 596 EXO70 exocyst subunit family AT2G39380 51.236 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0417 K07195 - vvi:100248374 1139.02