Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0371 ATGGGGAAGAGCTATCCTACTGTGAGCGAGGAATACAAAAAGGCTGTAGAAAAAGCCAAGAAGAAGCTCAGAGGCCTCATCGCTGAGAAGAACTGTGCTCCGATTATGCTCCGAATCGCATGGCACTCTGCCGGTACCTTCGATGTGAAGACGAGAACCGGAGGTCCTTTCGGAACGATGAAGAAGCCAGAAGAGCTAGCTCACGGAGCCAACAACGGTCTTGATATAGCCGTTAGGCTCTTGGAACCTATCAAGGAACAATTCCCTATCATTTCGTACGCTGACTTCTATCAGTTGGCTGGAGTTGTTGCTGTTGAGGTCACTGGAGGGCCTGAAATTCCTTTCCACCCAGGGAGAGAGGACAAGCCGGAGCCACCACCTGAGGGTCGTCTGCCAGATGCCACCAAAGGATGCGATCACTTGAGACAGGTGTTTGTTACTCAAATGGGTCTCAGCGACAAGGACATCGTAGCTCTCTCTGGGGCCCACACCCTGGGAAGGTGCCACAAGGAGCGCTCTGGATTTGAAGGACCCTGGACCTCCAACCCTCTGATCTTTGATAACAGCTACTTCAAGGAACTCCTTAGCGGAGAAAAGGAAGGTCTTCTACAGCTGCCAAGTGATAAAGCTCTTCTCTCAGACCCAGCCTTCCGTCCTCTTGTTGAGAAATATGCCGCTGATGAAGATGCCTTCTTTGAGGATTACAAAGAAGCCCATTTGAAGCTCTCTGAGCTGGGATTTGCTGATGCCTAA 753 0.5086 MGKSYPTVSEEYKKAVEKAKKKLRGLIAEKNCAPIMLRIAWHSAGTFDVKTRTGGPFGTMKKPEELAHGANNGLDIAVRLLEPIKEQFPIISYADFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDATKGCDHLRQVFVTQMGLSDKDIVALSGAHTLGRCHKERSGFEGPWTSNPLIFDNSYFKELLSGEKEGLLQLPSDKALLSDPAFRPLVEKYAADEDAFFEDYKEAHLKLSELGFADA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0371 250 Gene3D Peroxidase, domain 2 132 239 - -
Vvi6g0371 250 Gene3D - 19 246 - -
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 197 222 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 Coils Coil 9 29 - -
Vvi6g0371 250 FunFam L-ascorbate peroxidase, cytosolic 132 239 - -
Vvi6g0371 250 CDD ascorbate_peroxidase 23 250 - -
Vvi6g0371 250 FunFam Cytosolic ascorbate peroxidase 19 136 - -
Vvi6g0371 250 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Vvi6g0371 250 MobiDBLite consensus disorder prediction 115 133 - -
Vvi6g0371 250 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 MobiDBLite consensus disorder prediction 113 133 - -
Vvi6g0371 250 ProSiteProfiles Plant heme peroxidase family profile. 74 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 9 246 IPR044831 GO:0004601|GO:0034599
Vvi6g0371 250 Pfam Peroxidase 20 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g0371 250 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Vvi6g0371 250 SUPERFAMILY Heme-dependent peroxidases 2 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0371 Vvi-Chr6 4441617 4446360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0371 91 242 Peroxidase AT4G16270 34.375 1.62e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0371 K00434 - vvi:100233013 491.115