Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0361 ATGGAATTTATAGACAACTTGCCGCCTATGGATCTGATGCGCTCCGAGAAGATGACTTTCGTTCAGCTCATCATCCCTGTCGAATCCGCTCACCGAGCCGTCTCATATCTAGGCGAACTTGGTCTTCTCCAATTCCGTGATTTAAATGCTGATAAAAGCCCTTTTCAGCGGACATTTGTTAATCAGGTAAAACGATGTGGAGAGATGGCAAGAAAGCTACGATTTTTCAAAGATCAAGTCAGTAAAGCTGGTTTAATCTCTTCTGCTCGTCCTGATCTGCAACCAGACATTGAGTTGGAGGAACTGGAGATACAACTTTCTGAGCATGAACATGAGCTACTGGAAATGAACTCTAATAGTGAGAAACTACGGCAAACATATAATGAGCTCCTGGAGTTCAAGATGGTATTGCAAAAGGCAAGTGGCTTCCTTGTTTCAAGCAAGAGTCATGCAGTTGTAGAGGAGAGAGAATTAGATGAAACTGCATACTCAAAGGATCGCTATGTAGAGACAGCATCTTTACTTGAACAGGAGATGGGGCCTGGACCATCGAACCAATCTGGTTTGAGATTTATTAGTGGGATTATTTGCAAGTCCAAAGCTCTTAGATTTGAGAGGATGTTATTTCGTGCTACTAGGGGCAATATGCTTTTCAATCAGGCAACAGCTGATGAACATATAATGGATCCTGTATCAACTGAAATGATTGAGAAAACAGTTTTCGTGGTGTTCTTCTCAGGGGAGCAGGCAAAAACAAAGATACTGAAAATTTGTGAAGCATTTGGTGCAAATTGCTATCCTGTGCCTGAAGATATGACCAAACAAAGGCAAATAAGTCGAGAAGTTTTAGCACGCCTCTCTGAATTGGAAGCCACTTTGGATGCTGGTATCCGTCACCGAAACAAAGCACTTTCTTCAATCGGATTCCACCTAATGAAATGGATGAACATGGTAAGAAGGGAGAAAGCAGTATATGATACACTGAACATGCTAAATTTTGATGTTACAAAAAAGTGTCTTGTTGGAGAGGGCTGGTGCCCAATATTTGCAAAAGCTCAGATTCAGGAGGCACTGCAACGTGCAACGTTTGATAGCAATTCACAAGTGGGCATAATATTTCATGTGATGGATGCTGTGGAATCACCTCCAACATATTTTAGAACCAACCGCTTCACAAATGCATTTCAGGAAATTGTTGATGCATATGGTGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACGTTTCCGTTTCTCTTTGCCGTGATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGTTGGGAGCATTAGTTCTTATAGCTCGTGAAAGTAAGCTTAGTTCTCAGAAACTTGGAAGCTTTATGGAAATGCTGTTCGGTGGGCGCTATGTACTGCTTTTGATGTCCATATTTTCAATTTACTGTGGATTGATTTACAATGAATTCTTCTCTGTACCCTATCACATATTTGGTGGATCTGCTTATAAATGTCGAGATGCTACCTGCAGTAATTCGAACACGGTTGGTTTAATCAAATACCAAGATACATACCCATTTGGCGTAGATCCCAGTTGGCGTGGAAGTCGTTCAGAGTTGCCTTTTTTGAACTCCCTCAAAATGAAGATGTCTATTTTGTTGGGTGTGACACAGATGAACCTAGGAATTGTGTTAAGTTACTTTAATGCACGTTTCTTTGGAAGCTCATTGGATATAAGGTATCAGTTTGTGCCACAAGTGATATTTCTCAACAGCCTTTTTGGGTATCTATCGCTTCTCATTATCATAAAATGGTGCACTGGTTCTCAAGCTGATCTCTATCATGTGATGATCTACATGTTCTTGAGCCCCACTGACAATCTTGGTGAGAATCAGTTGTTTTGGGGCCAGAGACCACTCCAAATCATACTGTTGCTTTTGGCTCTTATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATTTTGAAGAAGCTTCATTCGGAGAGGTTTCAAGGTCGTGCCTATGGGATACTTGGCACATCTGAGATGGATCTTGAAGTGGAACCTGATTCTGCACGACAACATCATGAGGAGTTTAATTTTAGTGAGATTTTTGTGCATCAAATGATACATTCCATTGAATTTGTCCTGGGTGCAGTTTCAAATACGGCATCTTACCTCCGACTTTGGGCTTTGAGCTTGGCCCACTCTGAATTGTCAACTGTTTTCTATGAGAAAGTCCTCCTCCTTGCATGGGGGTATAATAACTTTGTCATCCGGATGGTGGGGCTAGCAGTTTTTGCCTTTGCTACTGCTTTCATACTACTCATGATGGAGACACTTAGTGCTTTCCTCCATGCCTTGCGTCTCCATTGGGTGGAATTCCAAAATAAGTTTTACCATGGTGATGGCTACAAATTCAGACCTTTCTCCTTTGCTTCATTAATAGATGACGAAGACTAG 2457 0.4135 MEFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAVSYLGELGLLQFRDLNADKSPFQRTFVNQVKRCGEMARKLRFFKDQVSKAGLISSARPDLQPDIELEELEIQLSEHEHELLEMNSNSEKLRQTYNELLEFKMVLQKASGFLVSSKSHAVVEERELDETAYSKDRYVETASLLEQEMGPGPSNQSGLRFISGIICKSKALRFERMLFRATRGNMLFNQATADEHIMDPVSTEMIEKTVFVVFFSGEQAKTKILKICEAFGANCYPVPEDMTKQRQISREVLARLSELEATLDAGIRHRNKALSSIGFHLMKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKAQIQEALQRATFDSNSQVGIIFHVMDAVESPPTYFRTNRFTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESKLSSQKLGSFMEMLFGGRYVLLLMSIFSIYCGLIYNEFFSVPYHIFGGSAYKCRDATCSNSNTVGLIKYQDTYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVTQMNLGIVLSYFNARFFGSSLDIRYQFVPQVIFLNSLFGYLSLLIIIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIILLLLALIAVPWMLFPKPFILKKLHSERFQGRAYGILGTSEMDLEVEPDSARQHHEEFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYNNFVIRMVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLIDDED* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0361 818 PANTHER VACUOLAR PROTON ATPASES 12 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vvi6g0361 818 Coils Coil 97 126 - -
Vvi6g0361 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
Vvi6g0361 818 Pfam V-type ATPase 116kDa subunit family 36 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0361 Vvi-Chr6 4296235 4318345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0361 2 811 Primary Pumps ATPases(2) AT2G28520 82.657 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0361 K02154 - vvi:100250193 1581.62