Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0331 ATGGAGGAAGATTTCGAGTTCGCTGATAAGGTTCCTCCCTCTTTTGAGCGCATGGGTAATGTGATAAAGGATGCTGATGCCAAAGGATTTAACCCAGGTTTGATAGTCCTGCTTCTTGTTGTCGGTCTGCTATTGGTTTTCCTAGTTGGGAACTATGCACTCTATGTGTATGCTCAGAAGACCCTTCCACCAAGAAAGAAGAAGCCTGTATCCAAGAAGAAGATGAAAAAGGAGAGGCTCAAGCAAGGTGTCTCAGCTCCAGGAGAGTAA 270 0.4519 MEEDFEFADKVPPSFERMGNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0331 89 PANTHER DNA-BINDING PROTEIN S1FA2 1 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vvi6g0331 89 MobiDBLite consensus disorder prediction 65 79 - -
Vvi6g0331 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vvi6g0331 89 MobiDBLite consensus disorder prediction 64 89 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Vvi6g0331 S1FA 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0331 - - vvi:100248443 160.229