Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0265 ATGGCGACCGATGTGGTCCAATCCAGTGGGAAGCAGCGAACAAGTACCACAAAATCGAGGTCATCCACGGCAACGTCTTCAACCTCAGAGACCTCAACAAAGCAGGGAACGCCGCGAATTCAACAAATCACAAGACCAAGGCCATCAACAGGAACAGCTTCAACATCAGAGGCCTCCACAAGCAACGTGAGCAGTGTTCCTTACGCCACAGGCTCGAGCTACATAGGCTCATCAGCAACATCGATTTCCAGCCGTACTTCATTGTCCAGCCTCCGCGACTCGTTGCCGGAGAACCCTCACATTTACGATTTCTCTGAGATAAGCTCCGCCACCAATAATTTCCTTGCCAAACGGTACTCACCGTCGTCTTCTTCCACCGCGTGCTGGCGGTGCACGCTCCGCGGCAAGGATGTGATAGTGTTCCAGCGCAAGTTCTGGCGGAGGCTGGAGATGGCGCAACTCAAACAACGATTGTCTGTGATCTGTAGAAGTCATCACAAGAGCATAACCAGGCTTCTCGGAGCGTCGATTTCTGGTGAACACTTATACCTAGTTTATGACTTTGTTAAGGGAGCAAACCTAGCGAATATCCTGAGAAACCAGAGGAACCCTGACTTCACTGTGTTGTCGACTTGGATTTCGAGAATGCAGATCGCCGCGGATCTCGCTGATGGTCTCGATTACATCCACAACAATACTGGATTGAGCATAAGCTTTGTGCATAACCGTATAAAAAGTAACAGCATTGTCATTACGGAGCCTATAAAGAGTAACCGTACATCCATTGCGGAGACTTTGCACAACGCCAAGATATGCCATTTTGGAACGGCCCAATTGTGCGGCGAAACCGACGAGAATCAGCTGCAGCCCCAGGTTTCTAAATATGAAGGCGAAATCGTGGAAGAAGAGTCCTTTTCGTCAACGAAATCTCCGGAGTTGAAGCGAACGAATAGCAGAGCGATGCAATTCGAAGGTGTCAGAGGATACATGTCGCCGGAATTCCAATCCACCGGAGTGGCGACGCAGCAATCAGATGTGTACGCGTTCGGAGTTGTGATCCTGGAACTCTTGTCTGGCGAAGAGCCATTGAAATACAAGTTCGATAAAACGACCGGCGAATTCAGACGAACGTCGGTGATCGACACTGCAAGAGCAGCAATCGACGATACCGATGGTAAAGATGGGAGATTGAGGAGGTGGGTGGACAAGAGGCTGAAGGACTCCTTTCCGGTTGAGGTTGCGGAGAAGGTGACACGTTTAGCACTGGACTGCGTACACGTGGACCCTGATCAACGGCCCGACATGAGCCACGTTTCTGGAAAGATTTCCAAGCTTCTCATACAGTCAAAGAATTGGTTGGATAAGTTGAAGGTTCCTACTGATATCTCGGTCTCGTTGGCTCCTCGTTGA 1410 0.5007 MATDVVQSSGKQRTSTTKSRSSTATSSTSETSTKQGTPRIQQITRPRPSTGTASTSEASTSNVSSVPYATGSSYIGSSATSISSRTSLSSLRDSLPENPHIYDFSEISSATNNFLAKRYSPSSSSTACWRCTLRGKDVIVFQRKFWRRLEMAQLKQRLSVICRSHHKSITRLLGASISGEHLYLVYDFVKGANLANILRNQRNPDFTVLSTWISRMQIAADLADGLDYIHNNTGLSISFVHNRIKSNSIVITEPIKSNRTSIAETLHNAKICHFGTAQLCGETDENQLQPQVSKYEGEIVEEESFSSTKSPELKRTNSRAMQFEGVRGYMSPEFQSTGVATQQSDVYAFGVVILELLSGEEPLKYKFDKTTGEFRRTSVIDTARAAIDDTDGKDGRLRRWVDKRLKDSFPVEVAEKVTRLALDCVHVDPDQRPDMSHVSGKISKLLIQSKNWLDKLKVPTDISVSLAPR* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0265 469 Gene3D Phosphorylase Kinase; domain 1 76 188 - -
Vvi6g0265 469 PANTHER OS09G0572100 PROTEIN 16 469 - -
Vvi6g0265 469 MobiDBLite consensus disorder prediction 1 65 - -
Vvi6g0265 469 ProSiteProfiles Protein kinase domain profile. 69 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0265 469 Gene3D Transferase(Phosphotransferase) domain 1 190 460 - -
Vvi6g0265 469 Pfam Protein kinase domain 154 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0265 469 SUPERFAMILY Protein kinase-like (PK-like) 95 442 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0265 Vvi-Chr6 3046167 3047576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0265 97 452 Receptor kinase-like Gene Family AT1G51940 29.917 1.44e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vvi6g0265 Pkinase 1.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0265 - - vvi:100248439 828.55