Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0224 ATGGCTTCTCTTCCACTCTCCTCCTCCTGCCATCTAGGGTTCCGCCCTTTCTCTCGCGGCCAATCGCCGCCGTCCATTTCTTTCCTCAGATCCAGATCCACATCCAATGGCGGCAAGCAGTTCCAACAGAGTTTGTTAACTACCACCACTAACCCCCTGCGAGTTCCCTCGCCAATCTCACAGACCAATCGCGTTGCGAGAAAGCTAACCACCGTCGTTCGCGCTTCTTCCTCCACTGCCGTCACCTCTAATCCCAATCCGCCATGGCAGGGCGCGGCGCTGAAGCCGCTCGCTGCTGCGATCGCCACCGGGGTCATCCTATGGTTCGTGCCGCAGCCGGCCGGTGTCTCGAGGAACGCGTGGCAGCTGCTCGCGATCTTCCTCGCCACCATCGTCGGCATCATCACGCAGCCGCTGCCGCTCGGAGCCGTCGCGCTCCTCGGCCTAGGCGCATCCGTGCTCACCAAAACTCTCACTTTCGCCGCTGCCTTTTCCGCTTTCGGCGATCCGATCCCGTGGCTTATCGCGCTCGCTTTCTTCTTTGCCAGAGGTTTTATCAAGACCGGACTCGGCAATCGCATTGCCTATCAGTTCGTTTCGCTCTTCGGAAGTTCATCGTTGGGGCTAGGGTATAGTTTAGTGTTCAGCGAAGCTTTGCTGGCGCCGGCCATACCGTCCGTGTCGGCGAGAGCCGGCGGAATTTTTCTTCCATTGGTCAAATCACTCTGTGTTGCCTGCGGTAGCAATGTTGGAGACGGCACCGAGAATCGGCTGGGGTCTTGGTTGATGCTCACTTGTTTCCAGACGTCTTGCATTTCGTCTGCCATGTTTTTGACAGGAATGGCTGCGAACCCGTTGAGTGCAAATTTGACTTTTAACACTATCAAGCAGACTCTTGGGTGGACTGAGTGGGCGAAGGCTGCGTTTGTGCCCGGTTTGGTGTCCTTGATTGTTGTGCCATTGCTTTTGTATGTGATTTATCCGCCCACTGTGAAGAGCAGTCCCGATGCACCAAAGCTTGCTAGGGAGAAGCTGGAGAATATGGGGCCTATGTCTCGGAATGAGATTATAATGGCGGTGACTCTGCTTCTCACGGTGGGGCTGTGGATTTTTGGAGGTGTGCTGAATGTTGATGCTGTTACTGCTGCAATTCTGGGGTTATCTGTCCTCCTTGTGACTGGGGTTGTGACATGGAAGGAGTGCTTAGCAGAATCAGTTGCCTGGGATACCCTCACATGGTTTGCTGCACTTATCGCAATGGCAGGGTATCTTAACAAATACGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTAAAGTTTGTTGGCGGATTGGGTCTTTCATGGCAGCTATCTTTCAGCATTCTGCTTCTGCTCTATTTCTACTCTCACTATTTCTTTGCAAGTGGAGCTGCTCATATAGGTGCCATGTTCACAGCCTTCTTATCAGTTGCTAGTGCCCTAGGCACTCCTCCATATTTTGGAGCCATGGTGCTGGCCTTCCTTTCCAACCTCATGGGTGGCCTCACCCACTATGGCATTGGATCAGCACCCATTTTCTATGGTGCCAACTACGTATCCCTGGCCAAATGGTGGGGTTATGGATTCCTCATATCCATCGTTAATATTGTTATCTGGCTTGGAGTTGGTGGGGTGTGGTGGAAGGCCATTGGCTTGTGGTAA 1680 0.5333 MASLPLSSSCHLGFRPFSRGQSPPSISFLRSRSTSNGGKQFQQSLLTTTTNPLRVPSPISQTNRVARKLTTVVRASSSTAVTSNPNPPWQGAALKPLAAAIATGVILWFVPQPAGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFAAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENRLGSWLMLTCFQTSCISSAMFLTGMAANPLSANLTFNTIKQTLGWTEWAKAAFVPGLVSLIVVPLLLYVIYPPTVKSSPDAPKLAREKLENMGPMSRNEIIMAVTLLLTVGLWIFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFSILLLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAMVLAFLSNLMGGLTHYGIGSAPIFYGANYVSLAKWWGYGFLISIVNIVIWLGVGGVWWKAIGLW* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0224 559 MobiDBLite consensus disorder prediction 20 40 - -
Vvi6g0224 559 MobiDBLite consensus disorder prediction 15 40 - -
Vvi6g0224 559 CDD ArsB_NhaD_permease 131 553 - -
Vvi6g0224 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 63 559 IPR030676 -
Vvi6g0224 559 Pfam Sodium:sulfate symporter transmembrane region 96 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vvi6g0224 559 NCBIfam DASS family sodium-coupled anion symporter 111 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0224 Vvi-Chr6 2581696 2586055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0224 1 558 Antiporters AT5G12860 80.634 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0224 - - vvi:100253664 1014.99