Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0218 ATGGCTGAAATAGAGAATTTGGAACCGGATTTGGAGGAGCTGAGGGAGAGCTACAGGAGTGGCAAAACAAAGGAAGCCTCATGGAGGAAGTCACAACTCAAGGGTTTGCTCACTCTCCTCAAGGAACAGGAAAAGGATATCTTTAAGGCCCTTGAGCAAGATCTAGGCAAACATTATGCCGAGTCCTACAGAGATGAGGTGGGAACCCTAACAAAATCTGTGAATCTTGCATTGAGTTCCTTGAAAGACTGGATGTCAAGCAGAAAGGCTAAATTACCAATAGCTACATTCCCCTCAACAGCAGAAGTGTTTCCAGAGCCTCTTGGCCTTGTTCTCATTATCTCTTCTTGGAATTTTCCCTTTGGGCTGTCCCTGGAACCAGTGATTGGAGCAATAGCAGCAGGAAACTCAGTAGTTCTAAAGCCTTCAGAGCTGGCTCCAGCCAGCTCTTCTCTTCTAGCAAAAACCATTCCTACTTACCTAGACAAAAAAGCTGTCAAGGTCATCGAGGGCGGGGCCGCCGTTGGCGAACATCTCCTCCGCTGTAAATGGGACAAGATCTTCTTCACAGGAAACCCCCGAGTGGGACGTGTTGTAATGACTGCAGCTGCTAATCATCTAACGCCTGTTACATTGGAGCTGGGTGGAAAATGTCCAGCCATATTTGATTCATTTTCAAGTTCTTGGGACAAAGAGATGGTGATAAAACGAGTTCTTGGAGGGAAATTCGGGGCCTGCGCCGGTCAAGCATGCATAGCGATCGATTACATCCTAGTCCAAGAAGGATTTGCACCCACCTTGCTAGAATTGTTGAGGAACATGACCAAGAAAATGTTTGGTGAAAACCCTAGAGAAACAAAAAGCATGGCAAGGATAATCAACAAAAAACATTTCTTAAGGCTGAAGAACATTCTTGATGATCCCTCAGTCCAATCTTGTATTGTCCATGGCGGTGGGGTGGATGAAGACAACTTGTTCATCGAGCCAACGATCTTGATGAATCCTCCTCTCAAAGCTTCCATTATGACCGACGAAATCTTCGGTCCATTGCTTCCTATAATTACATTAAAGAAGATTGAAGACAGCATTGAGTTCATAAACTCAAGGCCTAAAGCACTAGCCATTTATGTCTTCACCAAAAATGAAACTTTGAAGAGAAGGATAATCTCCGAGACATCATCGGGAAGCGTGACCTTCAACGATGCAATCATTCAGTATGCAGCAGACACCATCCCTTTTGGAGGCGTTGGCGAATCTGGTTTTGGGAGGTACCATGGGAAGTTCTCCTTCGACACCTTCACACACGAGAAGGCGATCCTAAGAAGAAGCTTGCTCACTGAGTTCTGGTTTAGATTTCCTCCGTGGAATGACTTTAAGTTGGCACTCACCAAGTCAGCTTACCGCTTCGATTACTTTGAATTCCTGCTTGTCCTCTTGGGCTTGAAGAAAAATTCTTAA 1458 0.4513 MAEIENLEPDLEELRESYRSGKTKEASWRKSQLKGLLTLLKEQEKDIFKALEQDLGKHYAESYRDEVGTLTKSVNLALSSLKDWMSSRKAKLPIATFPSTAEVFPEPLGLVLIISSWNFPFGLSLEPVIGAIAAGNSVVLKPSELAPASSSLLAKTIPTYLDKKAVKVIEGGAAVGEHLLRCKWDKIFFTGNPRVGRVVMTAAANHLTPVTLELGGKCPAIFDSFSSSWDKEMVIKRVLGGKFGACAGQACIAIDYILVQEGFAPTLLELLRNMTKKMFGENPRETKSMARIINKKHFLRLKNILDDPSVQSCIVHGGGVDEDNLFIEPTILMNPPLKASIMTDEIFGPLLPIITLKKIEDSIEFINSRPKALAIYVFTKNETLKRRIISETSSGSVTFNDAIIQYAADTIPFGGVGESGFGRYHGKFSFDTFTHEKAILRRSLLTEFWFRFPPWNDFKLALTKSAYRFDYFEFLLVLLGLKKNS* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0218 485 Pfam Aldehyde dehydrogenase family 22 439 IPR015590 GO:0016491
Vvi6g0218 485 CDD ALDH_F3FHI 7 441 - -
Vvi6g0218 485 PANTHER ALDEHYDE DEHYDROGENASE 5 474 IPR012394 GO:0006081
Vvi6g0218 485 FunFam Aldehyde dehydrogenase 216 419 - -
Vvi6g0218 485 PIRSF ALDH 1 477 IPR012394 GO:0006081
Vvi6g0218 485 FunFam Aldehyde dehydrogenase 15 227 - -
Vvi6g0218 485 SUPERFAMILY ALDH-like 12 455 IPR016161 GO:0016491
Vvi6g0218 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Vvi6g0218 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0218 Vvi-Chr6 2522611 2528457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0218 5 483 Aldehyde Dehydrogenase Gene Family AT4G36250 55.532 0.0 592