Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0203 ATGGCTGAAAGGCACCAGCACCCAAATATTATGCGGAAGGTAGCTGGTCAGCTCCATCTCAGTTCCAGCATTTCCCAAGATGTTCATACTCACTATGGCAGTTTCCAAAGTCCTGCTCTGTACCAGAGGCGTTCTGCCTTTGGAAATTATTCTAATGTGGTATTGCAGTATCCCATGACCCAGTCATGTCAAGCTACCCAAGATCTGTCATTGATTGCCTCAACTGCTTCACCTGTGTTTGTTCAAGCCCCCCAGGAGAAAGGTTTTGCCAGCTTTGCTGTCGATTTTCTTATGGGAGGAGTTTCTGCAGCTGTGTCTAAAACAGCAGCTGCTCCAATTGAGCGTGTGAAGCTTTTGATCCAAAACCAGGATGAAATGATTAAGGCTGGACGGCTTTCTGAACCCTATAAGGGAATTGGAGATTGTTTTAGCCGAACAATCAAAGATGAAGGATTTGCATCATTATGGAGAGGGAACACGGCTAATGTCATCCGTTACTTCCCAACTCAGGCATTGAACTTTGCTTTCAAGGATTACTTTAAGAGACTGTTCAACTTTAAGAAGGACAGGGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGTGGTGCTGCTGGTGCTTCTTCCCTACTCTTTGTCTATTCCCTTGATTATGCCCGAACCCGTCTTGCAAATGATGCAAAAGCTGCAAAGAAAGGAGGAGGAGACAGGCAATTCAATGGCTTGGTTGATGTCTACAGAAAGACTCTCAAATCAGATGGGATTGCTGGGCTTTACCGAGGATTCAACATCTCATGTGTTGGTATCATTGTGTACCGTGGTCTCTATTTTGGAATGTACGATTCTCTGAAGCCAGTGATCCTGACTGGAAAGCTACAGGATAGTTTCTTCGCTAGCTTTGCTCTTGGTTGGGTTATCACAAACGGTGCAGGCCTCGCCTCCTATCCAATTGACACAGTCCGCAGAAGAATGATGATGACATCAGGTGAAGCCGTGAAGTACAAGAGTTCCTTGGATGCATTCAATCAGATCCTTAAGAATGAGGGTGCGAAATCTCTCTTCAAGGGTGCTGGTGCAAACATTCTTCGTGCAGTTGCTGGTGCCGGTGTGCTTGCTGGTTATGACAAGCTTCAGGTGCTTGTGTTGGGAAAGAAGTATGGTTCCGGTGGAGCCTAA 1182 0.4602 MAERHQHPNIMRKVAGQLHLSSSISQDVHTHYGSFQSPALYQRRSAFGNYSNVVLQYPMTQSCQATQDLSLIASTASPVFVQAPQEKGFASFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGDRQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0203 393 Gene3D Mitochondrial carrier domain 93 389 IPR023395 -
Vvi6g0203 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 288 IPR018108 -
Vvi6g0203 393 SUPERFAMILY Mitochondrial carrier 89 378 IPR023395 -
Vvi6g0203 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 183 IPR018108 -
Vvi6g0203 393 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 79 392 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g0203 393 PRINTS Adenine nucleotide translocator signature 195 208 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g0203 393 PRINTS Adenine nucleotide translocator signature 169 181 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g0203 393 PRINTS Adenine nucleotide translocator signature 301 317 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g0203 393 PRINTS Adenine nucleotide translocator signature 136 157 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g0203 393 PRINTS Adenine nucleotide translocator signature 92 104 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g0203 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 296 382 IPR018108 -
Vvi6g0203 393 FunFam ADP,ATP carrier protein, mitochondrial 93 389 - -
Vvi6g0203 393 PRINTS Mitochondrial carrier protein signature 158 178 IPR002067 GO:0055085
Vvi6g0203 393 PRINTS Mitochondrial carrier protein signature 210 228 IPR002067 GO:0055085
Vvi6g0203 393 PRINTS Mitochondrial carrier protein signature 108 122 IPR002067 GO:0055085
Vvi6g0203 393 PRINTS Mitochondrial carrier protein signature 95 108 IPR002067 GO:0055085
Vvi6g0203 393 PRINTS Mitochondrial carrier protein signature 305 327 IPR002067 GO:0055085
Vvi6g0203 393 PRINTS Mitochondrial carrier protein signature 261 279 IPR002067 GO:0055085
Vvi6g0203 393 Pfam Mitochondrial carrier protein 194 290 IPR018108 -
Vvi6g0203 393 Pfam Mitochondrial carrier protein 91 187 IPR018108 -
Vvi6g0203 393 Pfam Mitochondrial carrier protein 297 383 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0203 Vvi-Chr6 2358422 2360145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0203 1 393 Antiporters AT5G13490 81.934 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0203 K05863 - vvi:100260298 751.51