Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi6g0192 | ATGGATCATGATGAGACTGGATGCCAAGCTCATCCAGAGGGTCCCATTTTGTGCATAAACAATTGTGGGTTCTTTGGAAGCCCGGCAACTATGAACATGTGTTCCAAGTGCCACAAAGATATGATGTTGAAACAAGAGCAGGCTAAACTTGCTGCATCATCCATAGACAGCATTGTTAATGGATCGTCAAGCAACAATGGAAAGGAACCTGCTATTGCATCCACTGTGGATGTGCAAGTTGATGCAAAGGAGCCAAAGATCATTTCTGTGCAGTCATCCTTTTCTTTTGGCTCTGAGGGGAGTGGCGAGGCCAAGCCAAAGGAGGGTCCAAACCGGTGCAGCACCTGCAAGAAACGAGTTGGTTTGACAGGATTCAATTGTCGATGCGGTCACCTTTTCTGTGCAACACACCGCTACTCAGACAAACATGACTGCCCTTTTGATTATCGCACTGCTGCACGGGATGCGATAGCTAAAGCCAACCCTGTTGTCAAGGCAGAAAAGCTGGATAAAATCTAA | 519 | 0.4682 | MDHDETGCQAHPEGPILCINNCGFFGSPATMNMCSKCHKDMMLKQEQAKLAASSIDSIVNGSSSNNGKEPAIASTVDVQVDAKEPKIISVQSSFSFGSEGSGEAKPKEGPNRCSTCKKRVGLTGFNCRCGHLFCATHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI* | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi6g0192 | 172 | SUPERFAMILY | AN1-like Zinc finger | 102 | 167 | IPR035896 | - | |
Vvi6g0192 | 172 | Gene3D | - | 90 | 168 | IPR035896 | - | |
Vvi6g0192 | 172 | ProSiteProfiles | Zinc finger A20-type profile. | 12 | 46 | IPR002653 | GO:0003677|GO:0008270 | |
Vvi6g0192 | 172 | SMART | A20_3 | 15 | 39 | IPR002653 | GO:0003677|GO:0008270 | |
Vvi6g0192 | 172 | Pfam | A20-like zinc finger | 16 | 39 | IPR002653 | GO:0003677|GO:0008270 | |
Vvi6g0192 | 172 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 17 | 53 | - | - | |
Vvi6g0192 | 172 | Gene3D | - | 4 | 67 | - | - | |
Vvi6g0192 | 172 | SMART | AN1_Zf_4 | 113 | 150 | IPR000058 | GO:0008270 | |
Vvi6g0192 | 172 | Pfam | AN1-like Zinc finger | 113 | 149 | IPR000058 | GO:0008270 | |
Vvi6g0192 | 172 | ProSiteProfiles | Zinc finger AN1-type profile. | 107 | 153 | IPR000058 | GO:0008270 | |
Vvi6g0192 | 172 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 13 | 172 | - | - | |
Vvi6g0192 | 172 | FunFam | Zinc finger AN1-type containing 6 | 88 | 168 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi6g0192 | Vvi-Chr6 | 2249653 | 2250171 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi6g0192 | 4 | 172 | C2H2 Transcription Factor Family | AT3G52800 | 44.706 | 1.14e-39 | 130 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi6g0192 | - | - | vvi:100267237 | 340.117 |