Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0164 ATGGACTCGAGAAAATCAATAGAAGATCAATTCTCCAAGCTACATCCATCCCTGCCTGTGAGCACAAGAATTGGGATAGTGGGAGGTGGTCCAAGTGGCTTGTCAGCTGCTTATGCACTCGCTAAGCTTGGTTACAGTAATGTAACCGTGTTGGAGAAGTATCAAACTGTTGGGGGCATGTGTGAATCAGCAGAGATTGAAGGAAATATATATGATCTGGGTGGCCAAGTTCTTGCTGCAAATAGTGCCCCTGTTATCTTTCACTGGGCAAAAGAAATTGGGTCAGAACTAGAAGAAATGGACTCCCACAAACTCACCCTTATTGATAGTTCTACAGGGAAGCATAAGGACATAAAAGTTGCAGATGATTATGTATCTGTAATCTCACTGACTTTGGAACTCCAGGATAAGGCAAAGGATTCAGGTCGAATTGGGGTCCATGCTGTAAGTGAAATCGCTTCAGATTTGACTCCTGAGTTTCTTGAGGCTCGTGGATTTAAATCTGTTCCCAAGTCTGTGGCTTGTGGATACACTGCTTCTGGGTATGGGTTTGTCCAAGACATGCCTTATGCTTACATTCATGAGTTCACCCGGACTTCCATGGCTGGAAAAATTCGACGTTTTAAAGGTGGATACATGAACTTCTGGAAGAAGCTCAGTGAAATGCTGCCGATAGAAGTTCGTTGCAACACTGAAGTATTGGCAGTCAGACGCAGCTCTGCTGGCGTTAGTGTTGATGTGAAAAATTCTAATGGAGAAGTCGAAGTTATAGAGTTTGATGAGATCATCATCTCTGGATCCTTTCCTTTCAAGAATGGAAAAACTTACAGAGCACCCCCTTCAAGTTCAGCAGAACCTGAGACTGGGGTAATGGATATGAATGAGCTTGAAAAGAAGTTATTCAGTAAAGTACAAACAATTGATTACTATACAACCGTTTTGAAGATTAAAGGGCTGGAGCATATCCCAGTGGGATTCTATTATTTTGAGGAATTCATGGACGATCCTGCAACTATTGGACATCCAGTTGCAATGCAGAGATTCTACAACAACACTGATGTTTTCTTGTTCTGGTCTTATGGCAATTCTGTTGATATTAAGGGACCAACTGTTACTGAGCTCGCAATCAACACTGCTAAAAATATGGGAGGTGAAATTGAGGAGGTGGTTTTACAACGAAGATTCAAGTATTTTCCTCACATCAGCAGTCAAGATATGAAGGAAGGATTTTATGAGAAAGTGGAATCTGAACTTCAAGGCATGAGGAACACTTACTATGTAGGTGGCCTTATGGCATTTGAGCTCACAGAAAGAAACGCATCCTATGCCGTGGCTCTAGTCTGCAAGCACTTTGCAAATGACACTCCTTCACCAACATTTCCATATGTTAAGAGGTTGTTTCCATTGCAATCAGATGGGTGGGGTGGGAATCCCAAAATATTAGATGAATTCCCAGGAGTGAAGTTCCCCGATATTGCTTCCCTTGATGGCTATTTGAAGCACTGGGGGACTCATGAAGTCATCCAAAATAAAACACTCTATACCTGGATTAATGAAGAAGGGGTAGTGGTGAGCCAGAGGACTTACAGAGAACTTCATGCAAATGCTTCTTGCATTGCTCATAACCTCTTGTTAAACCAGAAACCATTGTTCAAGCCTGGTGACAGGGTTCTCCTGGTCTACATTCCAGGTCTGGATTTCATTGACGCCTTCTTTGGGTGCCTAAGGGCAAAACTCTTACCAGTTCCAGTTCTTCCTCCGGATCCACTGCAAAGAGGTGGACAGGCACTTCTGAAGATTGAAAATATTGCCAAATCATGCAATGCATTGGCCATTCTATCGACCATTAGGTATCATGCAGGTGTCTGTGCAGGTTCTGTGAAGAGTTTGATCTCATTTACAGGAAAAAATGGGAAAAACTCAGCTCGCTGGCCTAATCTTCCATGGTTACATACAGATTCTTGGATCAAGTATTCCAGAAACTTGCTTCAGGAAGATATTGCTGATCAATCTGAACCACAGCCAGATGATCTTTGTTTTCTGCAGTTCACCTCAGGGTCCACTGGTGATGCTAAAGGAGTGATGATAACTCATGGTGGGCTTATTCATAATGTGAAGTTGATGCGGAGGAGATACAAGAGCACCTCAAAGACAGTACTCGTGAGCTGGCTTCCTCAATACCATGACATGGGGCTGATTGGAGGACTTTTCTCTGCACTAGTTAGTGGTGGATCTGCAGTTTTATTTTCTCCAATGTCCTTCATCAAGAACCCCCTCTTATGGCTTCAGACCATGAGCAAGTTCCAGGCCACTCACAGCGCTGGCCCCAACTTTGCTTTTGAACTTGTGGTTCGAAGATTGGAGTCAGGCAAGGATACAGTTCACAATTATAATCTCTCTTCCATGATTTTCCTCATGGTTGCTGCAGAACCAGTGAGGCAGAATACACTGAAAAGATTTGTGAAGCTTACCAGCCCCTTTGGCCTTTGTGAAGAGGTATTGGCTCCTGGTTATGGCTTGGCAGAAAATTGTGTGTTTGTAAGTTGTGCATATGGAGAAGGGAAGCCCATCTTGGTAGATTGGCAGGAAAGAGTTTGTTGTGGTTATGTGGATACAGAGAATGCCGATGTTGACATCAGAGTAGTTGATCCCGAGACTGGTGAAGAGCAAGAGGAAGTTGGAAAGGAAGGAGAGATCTGGATTAGTAGTCCAAGTGCTGGAGTTGGGTACTGGGGCAGGGAAGAACTAAGTGGGAAAACTTTCAGAAATGAGCTTCAGAATCACCCTGGTAGGAGATACACTAGAACTGGAGATTTGGGACGAATCATTGACGGGAAATTGTTCATAACTGGAAGGATCAAGGATCTTATTATTGTAGCTGGAAGAAACATTTATGCAGCAGATGTAGAAAAGACTGTTGAGAGCTCATCAGAACTTCTTCGCCCAGGGTGCTGTGCTGTAATTGGTGTTCCAGAGGAAATCTTATCACAAAAGGGGATTTCATTGCCGGATCATTCTGATCAGGTTGGCTTGGTCGTGATTGCAGAGGTCAGAGATGGTAAACATGTTGGTAAAGATGTTATTGAACAAATTCAAGCACATGTTGCAGAAGAACATGGGGTTACTGTTGCTTCCATCAAGCTGATCAAACCCAAAACCATCAGTAAAACCACTTCAGGGAAAATAAAGAGGTTTGATTGCATCAGACAGTTCTCTGATGGAACACTGAGTTTAGTTCCGGAGCCTATATTGTCAAAAAAAGTATTGCATCGGTCTTTCACAACAGGAACATGTAGGGAGGGAAATACACCTCGACCTGAGCTCAATAAATATCCTCTAACAAATCCTAGGTTGAGTAAAGAAGATATTGTTGAGTTCCTGAAGGGTTTGGTTTCTGAGCAGACAGGAATTCCTATAAAGAACATCTTTGCCTCTGAGAGCCTATCCTCTTATGGGATTGATTCAATTGGAGTAGTGAGAGCAGCTCAAAAACTTTCAGACTTCCTTGGAGTTCCAGTTGGGGCAGTTGATATGTTCACAGCAACCTGCATCGCAGACTTGGCAAATTTCTCAGAGAATCTTGTAAGGAAGTCTCACCATCAATACATGACCGCTCCATCCTATGTTCCAGAACCTGAGACTGACTTGTCTGAGTTGGTGATGGAAATTGCACCATCTCACAAATTGGGCATTTGGTTTTTCCAACTTCTGGCCCTCATCTACATTTCTGTGTTGCTGATCATTCCTGCATATCTATCGGTTTCTGCTTTTATAAGTCTGCTCTCTACCTGCTGCAACCTTATAGATGGAACTTCTTGGTTGGATTATTTGATTTCTTTGGCTTTTGCTCCACTTGCATGGCTACTTTGCATATTCTCCACCTGCATATGTATTGCCTACTTGGGGAATTCATTCCTTCAACCGAACTATGCCCTGACCCCAGAAATTTCTATCTGGTCAAAGGATTTTGTTAAGTGGTGGGGACTTTACAAGGTCCAAGAAGTTGCTTCAAAAGTTCTAGCAGTGCATTTGAGAGGAACAGTGTTCCTGAAATGCTGGTTTGAGATGCTAGGAGCCAGAATTGGATCGTCTGTTTTGCTTGATACCATTGACATCACAGACCCATCTCTGGTTTCAATTGGGGATGGAGCTGTTATTGCAGAAGGAGCACTGATCCAAAGCCATGAGGTGAAAAATGGAATCTTGAGTTTCCTACCAATCAGAATTGGACAAAATTGTTCTGTTGGTCCTTATGCTCTGATCCAGAAAGGAAGTGTTTTGGCAGAAGGAGCTGAAGTACAGGCCTCACAAAAGAGTGAAGGAGGGACATCTGTATTCCAATCTAACAAGGCTAATAATGTTCCAAAGGGTTCAGTGCTTCCAAAAGATTCCAGAAATGCTCAGATTGAGGCCATTTACCACTTCTTGGGAATTTACATGGTTGGTTTCCTCAGCTCTCTCGCAGCAGCTCTCTTCTACTTCCTCTACCTTTGGCTGTCTAGAAGTCCCCCATCCTTTCAACACTTTACTTTTCTTTGCATCTCTGGAGCCTTTCACTGGTTTCCCTTCACCATTATTGCATATACTACCATGTTTTCAAGTGCCTCCTTGAGCCCACCTTACTTTGCCATCTCAGTTGCTGTTGCTTATCTAGCTCATGGCTTGATACTTAGCTTTCTCACCTGCACCATGACACGCTTCCTTGCTAGAAAACCCGATACAAAGCAGAGCCACATGAAAACCTGGCTCAGACACCGAATTATGATTGCCTGCCATCTTAGATTTGCCAAACTCCTTTCTGGAACAGAAGCCCTCTGCATTTACTTGCGGCTTTTGGGTGCAAAAATTGGCAGTCATTGCTCCATCAGAGCCATCAACCCTGTTTCAGAACCAGAATTGATTTCAATTGGTGCTGGTGTCCATATGGGTGACTTCAGCCGAATCATTCCTGGTTTCTACTCATCCAGTGGTTTTACTTGTGGGCAAATTAAGGTCGAGGATAATTCGGTAGTTGGGAGTCAAAGCTTAGTCCTCCCTGGCTCTGTCCTTCAAAAAGATGTCATTCTTGGTGCACTTTCAGTTGCTCCAATGAATTCAGTTCTCCAAAGGGGTGGTGTTTATATTGGCTCTCAAACCCCAGTCATGATCAAGAACACACTGCATGCTTTGGATCAGAGAATAGAGGAGATGGATGTGAAATATAAGAGAATAGTGGGAAACCTTGCTGCAAATTTGGCTGTTACAACGATGAAGGTTAAATCAAGATATTTCCATCGAATTGGTGTAGGTGGGAAGGGAATCTTAAAGATTTATGACAATATTAAAGGGTTTCCAGATCACAAGATCTTCCAGCCAGGAAAAAGCTACCCTGTCCTAATCCGGCACAGCAATAGCTTGGCTGCTGATGATGATGCAAGGATTGATGCGCGTGGTGCAGCATTGAGAATACTGCCAGATGAACCTGGCAGTGACTCTCCACTCCTTGACCTGACATTGAAAACGGGCAATGCCTTTTATGCCCGCACAATTGCTGATTTTGCAACATGGCTTGTGTGTGGGCTTGCTGCAAGGGAGGAGCATGTGAAGCGGATTCCACGAGTGCGTGATGCTGTGTGGGCTTCCCTGAGGCGAGCAGACTCATTTGCTGAGCTGCATTACTACTCAAACATTTGCAGGCTCTTTCGGTTCAAGGATGGACAGGAAATGTATGTGAAGCTCAAGTTAAGGCCTTATGATGAAAAGTTCAGTGAGGATTCCGGTAAGATCGAACCAATTGGGATCCTCCCACCAGAAACAGGTGCAATTCCAAGGGATGATACCGACACACGCCCATTGCTCTTCCTTGCTGAAGATTTCCAGCAACGTGTGAATTCTGCTGGTGGGGTTCGCTATGTTTTCCAGATGCAATTCCAGCCAGTTCCAGGTGATGAAGCCACCTGTGACAGTGCCCTTGACTGCACCAAACCGTGGGACGAGAATGAATTCCCACATATCGATGTTGGGGAAATAATTGTTGATCAGATGCTTACCAGAGAAGAATCTGAGCAGCTGGAGTTTAATCCATTTCTACAGTGCCATGAAGTGGATGTCATCCGGGCTTCATCATCTTCCCAGAGTGCTTCAATTGACCATGGCCGTTCATTGATATATGAGATTTGCCAGCATTTAAGAAACAGGGAACCACTCCCCGAAGCCTGGAGGATCTTCCTAGAGCAATCTGATTTTAAAGTAGACCTTTCTGGCTGTCCCATGGCAGCAGCATTGCAGAAAAAAGATGTCCAAAATGTGACCCTCTCAAGGACTTGGTACCAGACCTTATGGGTTATTTTTGCTCAACCATTGCTGCAAACGGTTTTGCCTTATTTCATCATGGGGCTAGTAGTCTTTGCTCCTCTAAACTGGGTCTTTTACTGGAAGAACACCAAGAAACTCCCACTTCACTGGTTGCTTCCTTTCTTTTGGCTATCTTCAGGGACTTTGGCTGCCTTGGTTTGCATAGTGGCCAAATGGGGTTTGGTCGGAAAGAAAAAAGAAGGCGAAACTGCACTGATTTGGAGTAGAAGTGTCTTCATGGACACTATATGGCAAGCCTTTAGGACACTGGTAGGGGAGTATTTCATGGAAATGATAACTGGGTCTTTTTTGTTTGCTCTGTGGATGAGGCTCATGGGATCGAATATTGAGCTGAATGAAGGGGCTTATGTGGATAGCATGGGAGCCGTGTTGAATCCTGAGATGGTAGAGATTGAGAGAGGTGGATGTGTGGGAAGAGAAGCTCTTCTGTTTGGGCACATATATGAAGGTGAAGGTGGGAAAGTGAAGTTTGGGAAGATCAGCATTGGGGAAGGTGGTTTTGTAGGGAGTAGAGCTGTGGTCATGCCTGGGGTGAGAGTGGAGACTGGAGGCAGCCTCAGTGATCTCTCCCTTGCCATGAAGGGAGAAATTGTGAAGCCTAGGTAA 6960 0.4418 MDSRKSIEDQFSKLHPSLPVSTRIGIVGGGPSGLSAAYALAKLGYSNVTVLEKYQTVGGMCESAEIEGNIYDLGGQVLAANSAPVIFHWAKEIGSELEEMDSHKLTLIDSSTGKHKDIKVADDYVSVISLTLELQDKAKDSGRIGVHAVSEIASDLTPEFLEARGFKSVPKSVACGYTASGYGFVQDMPYAYIHEFTRTSMAGKIRRFKGGYMNFWKKLSEMLPIEVRCNTEVLAVRRSSAGVSVDVKNSNGEVEVIEFDEIIISGSFPFKNGKTYRAPPSSSAEPETGVMDMNELEKKLFSKVQTIDYYTTVLKIKGLEHIPVGFYYFEEFMDDPATIGHPVAMQRFYNNTDVFLFWSYGNSVDIKGPTVTELAINTAKNMGGEIEEVVLQRRFKYFPHISSQDMKEGFYEKVESELQGMRNTYYVGGLMAFELTERNASYAVALVCKHFANDTPSPTFPYVKRLFPLQSDGWGGNPKILDEFPGVKFPDIASLDGYLKHWGTHEVIQNKTLYTWINEEGVVVSQRTYRELHANASCIAHNLLLNQKPLFKPGDRVLLVYIPGLDFIDAFFGCLRAKLLPVPVLPPDPLQRGGQALLKIENIAKSCNALAILSTIRYHAGVCAGSVKSLISFTGKNGKNSARWPNLPWLHTDSWIKYSRNLLQEDIADQSEPQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRRRYKSTSKTVLVSWLPQYHDMGLIGGLFSALVSGGSAVLFSPMSFIKNPLLWLQTMSKFQATHSAGPNFAFELVVRRLESGKDTVHNYNLSSMIFLMVAAEPVRQNTLKRFVKLTSPFGLCEEVLAPGYGLAENCVFVSCAYGEGKPILVDWQERVCCGYVDTENADVDIRVVDPETGEEQEEVGKEGEIWISSPSAGVGYWGREELSGKTFRNELQNHPGRRYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYAADVEKTVESSSELLRPGCCAVIGVPEEILSQKGISLPDHSDQVGLVVIAEVRDGKHVGKDVIEQIQAHVAEEHGVTVASIKLIKPKTISKTTSGKIKRFDCIRQFSDGTLSLVPEPILSKKVLHRSFTTGTCREGNTPRPELNKYPLTNPRLSKEDIVEFLKGLVSEQTGIPIKNIFASESLSSYGIDSIGVVRAAQKLSDFLGVPVGAVDMFTATCIADLANFSENLVRKSHHQYMTAPSYVPEPETDLSELVMEIAPSHKLGIWFFQLLALIYISVLLIIPAYLSVSAFISLLSTCCNLIDGTSWLDYLISLAFAPLAWLLCIFSTCICIAYLGNSFLQPNYALTPEISIWSKDFVKWWGLYKVQEVASKVLAVHLRGTVFLKCWFEMLGARIGSSVLLDTIDITDPSLVSIGDGAVIAEGALIQSHEVKNGILSFLPIRIGQNCSVGPYALIQKGSVLAEGAEVQASQKSEGGTSVFQSNKANNVPKGSVLPKDSRNAQIEAIYHFLGIYMVGFLSSLAAALFYFLYLWLSRSPPSFQHFTFLCISGAFHWFPFTIIAYTTMFSSASLSPPYFAISVAVAYLAHGLILSFLTCTMTRFLARKPDTKQSHMKTWLRHRIMIACHLRFAKLLSGTEALCIYLRLLGAKIGSHCSIRAINPVSEPELISIGAGVHMGDFSRIIPGFYSSSGFTCGQIKVEDNSVVGSQSLVLPGSVLQKDVILGALSVAPMNSVLQRGGVYIGSQTPVMIKNTLHALDQRIEEMDVKYKRIVGNLAANLAVTTMKVKSRYFHRIGVGGKGILKIYDNIKGFPDHKIFQPGKSYPVLIRHSNSLAADDDARIDARGAALRILPDEPGSDSPLLDLTLKTGNAFYARTIADFATWLVCGLAAREEHVKRIPRVRDAVWASLRRADSFAELHYYSNICRLFRFKDGQEMYVKLKLRPYDEKFSEDSGKIEPIGILPPETGAIPRDDTDTRPLLFLAEDFQQRVNSAGGVRYVFQMQFQPVPGDEATCDSALDCTKPWDENEFPHIDVGEIIVDQMLTREESEQLEFNPFLQCHEVDVIRASSSSQSASIDHGRSLIYEICQHLRNREPLPEAWRIFLEQSDFKVDLSGCPMAAALQKKDVQNVTLSRTWYQTLWVIFAQPLLQTVLPYFIMGLVVFAPLNWVFYWKNTKKLPLHWLLPFFWLSSGTLAALVCIVAKWGLVGKKKEGETALIWSRSVFMDTIWQAFRTLVGEYFMEMITGSFLFALWMRLMGSNIELNEGAYVDSMGAVLNPEMVEIERGGCVGREALLFGHIYEGEGGKVKFGKISIGEGGFVGSRAVVMPGVRVETGGSLSDLSLAMKGEIVKPR* 2320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0164 2319 ProSitePatterns Putative AMP-binding domain signature. 681 692 IPR020845 -
Vvi6g0164 2319 SUPERFAMILY ACP-like 1117 1213 IPR036736 -
Vvi6g0164 2319 Gene3D - 1113 1193 IPR036736 -
Vvi6g0164 2319 SUPERFAMILY Heme-dependent catalase-like 1686 2058 IPR020835 GO:0020037
Vvi6g0164 2319 Gene3D Catalase core domain 1717 2065 - -
Vvi6g0164 2319 SUPERFAMILY Trimeric LpxA-like enzymes 1606 1710 IPR011004 -
Vvi6g0164 2319 ProSitePatterns Phosphopantetheine attachment site. 1150 1165 IPR006162 -
Vvi6g0164 2319 Gene3D Hexapeptide repeat proteins 1356 1465 - -
Vvi6g0164 2319 SUPERFAMILY Trimeric LpxA-like enzymes 2172 2304 IPR011004 -
Vvi6g0164 2319 ProSiteProfiles Carrier protein (CP) domain profile. 1121 1195 IPR009081 -
Vvi6g0164 2319 Gene3D - 954 1081 IPR045851 -
Vvi6g0164 2319 Gene3D - 94 202 - -
Vvi6g0164 2319 SUPERFAMILY FAD/NAD(P)-binding domain 22 270 IPR036188 -
Vvi6g0164 2319 Gene3D - 23 447 IPR036188 -
Vvi6g0164 2319 Pfam Flavin containing amine oxidoreductase 32 267 IPR002937 GO:0016491
Vvi6g0164 2319 Gene3D - 482 953 IPR042099 -
Vvi6g0164 2319 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 2077 - -
Vvi6g0164 2319 Gene3D Hexapeptide repeat proteins 1585 1711 - -
Vvi6g0164 2319 PRINTS Adrenodoxin reductase family signature 47 60 - -
Vvi6g0164 2319 PRINTS Adrenodoxin reductase family signature 23 45 - -
Vvi6g0164 2319 Gene3D - 304 397 - -
Vvi6g0164 2319 SUPERFAMILY Acetyl-CoA synthetase-like 508 1075 - -
Vvi6g0164 2319 CDD FAAL 510 1073 IPR040097 GO:0008610
Vvi6g0164 2319 Pfam AMP-binding enzyme 526 959 IPR000873 -
Vvi6g0164 2319 SUPERFAMILY Trimeric LpxA-like enzymes 1341 1435 IPR011004 -
Vvi6g0164 2319 Pfam Phosphopantetheine attachment site 1126 1190 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0164 Vvi-Chr6 1927233 1934853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0164 676 992 Monolignol Biosynthesis Gene Families AT1G20480 26.730 8.61e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0164 - - vvi:100253550 4566.91