Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0151 ATGACTTTTGAACATAGAGTGAGTCTACAGCATAAACAAATCAGAAATGAAGGTTTCTTGCTGGCTATTTGGTTCAACAAAATACCTGAAAAGACAATAGTCTGGTCGGCCAATGGCAATAATCTAGTGCAAAGAGGATCCAGAGTTGAACTCGCCACTGGTGGCCAGTTTGTGCTCAATGACCCAGAAGGGAAACAGATATGGAATGCCGTTTATGCCAGTAAAAGCAACATATTTTTGGGCTCATCCCTCACTGCAATGAACAACAGTTTCTTTCTGGCACCCCCATCTGGTGAATTTGATTTCAGATTCCAACAGATCAGAGCTGGAGGTTTCTTGATAGCCAGTTGGGGCAAGAAGATACCTGAAAAGACCATAGTTTGGTCAGCCAATGGAAACAATCTATTAAATGGATGCTCAAGGAACATTCATCTTCAGTGGTATAAACTTCGTTTTGATTTCTGCAATTCATATCAAATCTTTAGCTTTTCCTTGTTTAAGAAAATTTTCTCTTTTTACATGGATTTTTCACTTCCTTCTGCTTTGCCCCTCTTGATAACTTTTCTTCTGCCATTTTTGAGCATTGCTCAAATATATAGTAACATAACTTTGGGATCATCCCTCACTGCACTGGACAACAATTCTTTTTGGGCATCACTTTCTGGTGATTTCGCTTTTGGATTCCAACAGATTGGAGGTGGAGGTTTCTTACTGGCTATTTGGTTCAACAAAGTACCTGAAAAGACAATAATTTGGTCATCGAACCGCAATAATGTCGTACAAAGCGGATCCAAAGTTCAACTTACCACTGATGGTTTGTTTGTGCTCACTGACTCGACAGGTGAGCAGGTATGGATGGCTGATCCAGCTGTTGCCTATGCAGCCATGCTTGACACTGGAAACTTTGTGCTGGCAAGCCAAGATTCTACCAACTTGTGGGAGAGTTTTGATCATCTGACAGACACACTATTACCCACACAGATGCTGAATCAAGGCAGCAAACTTGTTGCTCGTTCCTCAGATGTGAGTTACTCAAGTGGAAGATTCATGTTTGCATTGCAAACTGATGGAAATCTCGTGATGTACACCACAGATTTTCCAATGGATTCTGCAAATTTTGCTTACTGGTCAACACAGGCTATTGGCTCTGGCTTTCAAGTTATCTTCAACCAGTCTGGCCACATCTACGTCGTGGTGAGGAAAGAAAGCATACTTAGCGATGCTTTATCGAATGAAGTTTCAATGAGAGACTTCTACCAGAGAGCAATTCTTGAATATGACGGGGTTTTCAGGCAATATGTCTACCCAAAGACTGCTGGCTCAAGGTCTGGTAGGTGGCCTATGGCCTGGTCCACTTTATCTTCATTTATACCTGACAATATCTGCAGGATAATTAGGGCAGACACAGGAAGTGGAGCTTGTGGCTTCAACAGCTACTGCACACAAGAAGATGATAAGACACTGCACTGCCAGTGCCCTCCTGGTTACAGCTTCTTGGATCAGAAAAATGAAATGAAAGGATGCAAACAGGACTTTGTACCAGAGAGTTGCGATGAAAAATCACAAAAGATGGGTCTGTTTCACCTTGAAGAGATAACAAATGTGGATTGGCCATTGTCATATTATGAATATTTTCAACCACTCTGTTTCCTGAACTTGCTTCTCCTCCTTGCAACTATTATATTCATCTTTCTCTTGAATCACAGAAAATCGAAGATTCTTCAACCACACCCGGTCATGGTGGGCAGAAATCTACAAATTTTCACATACAACAAGCTAGAAGAAGCCACCAATGGATTCAAGGATCAACTGGGGAGGGGGGCCTTTGGAACAGTTTACAAAGGTGTTCTAAACCATGAGAATGGAAATTTCAATGCAGTCAAAAAGTTGGACAAGATGGTGAAAGAAGGAGAGCAAGAATTTGAAACAGAAGTGAAAGCAATTGGCCGGACAAATCATAAGAATCTAGTCCAACTTCTGGGTTTCTGCAATGAGGGGCAAAACCGGCTTCTAGTATACAAGTTCATGAGCAATTGTTCTTTGGCAACCTTCCTATTTGGAAATTCAAGGCCAAATTGGTATAAAAGAATACAGATTGTCCTAGGAACTGCAAAAGGGCTCTTGTACTTGCATGAAGAGTGCAGCACCCAGATCATACAATGTGACATCAAGCCTCAAAATATACTCCTAGATAGCTTTTTAACAGCAAGGATTTCAGATTTTGGGTTAGCCAAGCTTTTGAAGACAGACCAGACTCAGACGATGACTGCAATCAGGGGAACCAACGGATATGTTGCCCCTGAGTGGTTCAAGACAGTGCCTATCACATTCAAGGTTGATGTTTACAGCTTTGGAATTGTGCAGCTAGAGCTCATTTTCTGCAGGAAGAATTTTGAACCAGAGTTGGAGGATGAATATCGGATGGTATTGGCTGAATGGGCATATGATTGCTACCATAAAGGAAAACTGGATCTACTATTGGAAAATGATCAGGAGACATTGAATAAGATGGAGAAGCTGGAGAAGTTTGTGATGATAGCAATCTGGTGCATTCAGGAGGATCCATCTCGAAGACCTACCATGAAGAAAGTCATACAGATGCTAGAAGGAGCCATTCAAGTTCCTCTTCCTCCAGACCTTTCCTCGTGGCCCATGGCATGGTCCCCTTCGCCCTCCATACCTGGAAATATCTGTATGAGAATTACAGAAAATACAGGTGGTGGCGCTTGCGGGTTCAACAGTTACTGCATATTAGGAGATGATCAGAGACCAAATTGCAAATGCCCCACAGGTTATGACTTCCTAGATCAAAGTGACAAGATGAGTGGATGCAAACAGAATTTTGTCACACAAAATTGTGATCAAGCATCACGAGAAACAGATCAATTTTATTTTCAAGAGATGCCTAATACAGATTGGCCACTATCTGATTATGGATATTTTCAACCAGTGTCTGAGGATTGGTGCAGAGAAGCTTGCCTGACAGATTGTTTTTGTGCTGTTGCCATTTTCAGAGATGGTAATTGCTGGAAGAAAAAAATTCCACTCTCAAATGGGAGGATTGATCCTAGTGTTGGTGGAAAAGCTCTGATTAAGTTAAGGCAAGGCAATTCTACCACAAAACCTGGAGATGGAGATTCAAATAAGAAGCATCAATCAACCCTGATTCTCACTGGATCAGTGCTGTTAGGTAGCTCAGTGTTTCTGAACTTCCTTTTCTTTCTAGCAACTGTTCTATTCATTTTCCGCTTCAATAATAGAAAAACGAAGATGCTTCACACATATCTTTCCACTCTGGGAATGAATCTGCGAAGTTTCACTTACAATGAGCTAGATGAAGCTACAGATGGATTCAAGGAAGAACTGGGGAGAGGTGCTTTTGCAACAGTATACAAAGGGGTCCTTGCTTATGAAAAAGGGAAACTTGTAGCAGTCAAGAAGTTTGAGAAGATGATGAGAGAAAACGAGCAGGAATTCCAAACAGAAGTGAAAGCAATTGGCCAGACAAATCACAAGAATTTAGTCCAACTGCTAGGATTTTGCAAGGAGGGGGAACACCGGCTTCTGGTATATGAATTCATGAGCAATGGTTCCTTGGAAAAATTTCTCTTTGGAAACTCAAGGCCTAATTGGCACAAAAGAATACAGATTGCCTTTGGAATCGCAAGAGGGCTCTTTTACTTGCATGAAGAGTGCAGCACTCAAATCATACATTGCGATATCAAGCCCCAAAACATACTTCTAGACGACTCATTCAGTGCAAGAATTTCTGACTTCGGATTAGCCAAACTCTTGAAGACAGACCAAACTAGAACCACAACTGGAATCCGGGGAACCAAAGGTTATGTTGCCCCTGAATGGTTCAAGAGCATGCCTATTACAGTCAAGGTTGATGTTTACAGCTTTGGTATTTTGTTACTAGAGCTCATTTGCTGCAGGAAGAATCTTGAGTTTGAGGCAAAGGATGAAACTCAGATGATTTTAGCTGATTGGGCGTATGATTGCTACAAAGGAGGATTGCTAGAAGTGCTAGTGGGATATGATCAGGAGGCAATAGTTGAAATGAAGAGACTAGAGAAGTTTGTGATGATTGCAATATGGTGCATCCAGGAGGATCCATCTCTAAGGCCTACCATGAAGAAAGTCACCCAGATGCTTGAAGGAGCTGTTGAAGTCTCTGTTCCTCCAGACCCCTGCTCTTTCATCAGTTCAATCTAA 4218 0.4173 MTFEHRVSLQHKQIRNEGFLLAIWFNKIPEKTIVWSANGNNLVQRGSRVELATGGQFVLNDPEGKQIWNAVYASKSNIFLGSSLTAMNNSFFLAPPSGEFDFRFQQIRAGGFLIASWGKKIPEKTIVWSANGNNLLNGCSRNIHLQWYKLRFDFCNSYQIFSFSLFKKIFSFYMDFSLPSALPLLITFLLPFLSIAQIYSNITLGSSLTALDNNSFWASLSGDFAFGFQQIGGGGFLLAIWFNKVPEKTIIWSSNRNNVVQSGSKVQLTTDGLFVLTDSTGEQVWMADPAVAYAAMLDTGNFVLASQDSTNLWESFDHLTDTLLPTQMLNQGSKLVARSSDVSYSSGRFMFALQTDGNLVMYTTDFPMDSANFAYWSTQAIGSGFQVIFNQSGHIYVVVRKESILSDALSNEVSMRDFYQRAILEYDGVFRQYVYPKTAGSRSGRWPMAWSTLSSFIPDNICRIIRADTGSGACGFNSYCTQEDDKTLHCQCPPGYSFLDQKNEMKGCKQDFVPESCDEKSQKMGLFHLEEITNVDWPLSYYEYFQPLCFLNLLLLLATIIFIFLLNHRKSKILQPHPVMVGRNLQIFTYNKLEEATNGFKDQLGRGAFGTVYKGVLNHENGNFNAVKKLDKMVKEGEQEFETEVKAIGRTNHKNLVQLLGFCNEGQNRLLVYKFMSNCSLATFLFGNSRPNWYKRIQIVLGTAKGLLYLHEECSTQIIQCDIKPQNILLDSFLTARISDFGLAKLLKTDQTQTMTAIRGTNGYVAPEWFKTVPITFKVDVYSFGIVQLELIFCRKNFEPELEDEYRMVLAEWAYDCYHKGKLDLLLENDQETLNKMEKLEKFVMIAIWCIQEDPSRRPTMKKVIQMLEGAIQVPLPPDLSSWPMAWSPSPSIPGNICMRITENTGGGACGFNSYCILGDDQRPNCKCPTGYDFLDQSDKMSGCKQNFVTQNCDQASRETDQFYFQEMPNTDWPLSDYGYFQPVSEDWCREACLTDCFCAVAIFRDGNCWKKKIPLSNGRIDPSVGGKALIKLRQGNSTTKPGDGDSNKKHQSTLILTGSVLLGSSVFLNFLFFLATVLFIFRFNNRKTKMLHTYLSTLGMNLRSFTYNELDEATDGFKEELGRGAFATVYKGVLAYEKGKLVAVKKFEKMMRENEQEFQTEVKAIGQTNHKNLVQLLGFCKEGEHRLLVYEFMSNGSLEKFLFGNSRPNWHKRIQIAFGIARGLFYLHEECSTQIIHCDIKPQNILLDDSFSARISDFGLAKLLKTDQTRTTTGIRGTKGYVAPEWFKSMPITVKVDVYSFGILLLELICCRKNLEFEAKDETQMILADWAYDCYKGGLLEVLVGYDQEAIVEMKRLEKFVMIAIWCIQEDPSLRPTMKKVTQMLEGAVEVSVPPDPCSFISSI* 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0151 1405 SUPERFAMILY Protein kinase-like (PK-like) 1098 1387 IPR011009 -
Vvi6g0151 1405 ProSiteProfiles Bulb-type lectin domain profile. 201 317 IPR001480 -
Vvi6g0151 1405 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 676 876 - -
Vvi6g0151 1405 Gene3D Transferase(Phosphotransferase) domain 1 1194 1397 - -
Vvi6g0151 1405 Gene3D Transferase(Phosphotransferase) domain 1 676 879 - -
Vvi6g0151 1405 FunFam Uncharacterized protein 319 443 - -
Vvi6g0151 1405 ProSiteProfiles Protein kinase domain profile. 598 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0151 1405 Pfam D-mannose binding lectin 249 330 IPR001480 -
Vvi6g0151 1405 SUPERFAMILY alpha-D-mannose-specific plant lectins 19 77 IPR036426 -
Vvi6g0151 1405 FunFam Serine/threonine-protein kinase 320 465 - -
Vvi6g0151 1405 SUPERFAMILY Protein kinase-like (PK-like) 580 869 IPR011009 -
Vvi6g0151 1405 SUPERFAMILY alpha-D-mannose-specific plant lectins 236 379 IPR036426 -
Vvi6g0151 1405 FunFam S-receptor-like serine/threonine-protein kinase 1085 1193 - -
Vvi6g0151 1405 CDD PAN_AP_plant 949 1033 - -
Vvi6g0151 1405 SMART serkin_6 1116 1386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0151 1405 SMART serkin_6 598 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0151 1405 ProSitePatterns Protein kinases ATP-binding region signature. 1122 1147 IPR017441 GO:0005524
Vvi6g0151 1405 CDD STKc_IRAK 604 870 - -
Vvi6g0151 1405 Gene3D - 315 418 IPR036426 -
Vvi6g0151 1405 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1194 1394 - -
Vvi6g0151 1405 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 196 317 - -
Vvi6g0151 1405 ProSiteProfiles Protein kinase domain profile. 1116 1390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0151 1405 Pfam Protein kinase domain 601 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0151 1405 Pfam Protein kinase domain 1119 1384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g0151 1405 Gene3D - 198 314 IPR036426 -
Vvi6g0151 1405 CDD B_lectin 240 318 IPR001480 -
Vvi6g0151 1405 SMART blect_4 208 319 IPR001480 -
Vvi6g0151 1405 Gene3D Phosphorylase Kinase; domain 1 1090 1193 - -
Vvi6g0151 1405 Gene3D Phosphorylase Kinase; domain 1 565 675 - -
Vvi6g0151 1405 FunFam S-receptor-like serine/threonine-protein kinase 567 675 - -
Vvi6g0151 1405 CDD STKc_IRAK 1122 1388 - -
Vvi6g0151 1405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1236 1248 IPR008271 GO:0004672|GO:0006468
Vvi6g0151 1405 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 888 1399 - -
Vvi6g0151 1405 ProSiteProfiles Bulb-type lectin domain profile. 1 106 IPR001480 -
Vvi6g0151 1405 ProSitePatterns Protein kinases ATP-binding region signature. 604 629 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0151 Vvi-Chr6 1670470 1688125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0151 585 897 Receptor kinase-like Gene Family AT5G38280 40.683 7.36e-64 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi6g0151 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g0151 - - vvi:109122813 1077